RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 PSMC5P62195 406 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 KCNJ2P63252 427 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 CCDC173Q0VFZ6 552 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 ASPHQ12797 758 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 SMARCB1Q12824 385 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 ITGB3BPQ13352 177 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-222ENST00000545308 DMC1Q14565 340 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 PDGFRLQ15198 375 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 Q1RN00 199 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 LRRC36Q1X8D7 754 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 METTL11BQ5VVY1 283 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 SLC8B1Q6J4K2 584 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 TMEM220Q6QAJ8 160 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 SASS6Q6UVJ0 657 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 HSDL2Q6YN16 418 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 Q6ZSR3 168 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 SLC25A48Q6ZT89 311 aaKnown RBP3.05□□□□□ -1.92
SNHG1-222ENST00000545308 FRA10AC1Q70Z53 315 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 CEP112Q8N8E3 955 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 BBOF1Q8ND07 529 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 KLHL30-AS1Q8NEE0 82 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 OR7G2Q8NG99 324 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 FAM81AQ8TBF8 368 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 PLPPR1Q8TBJ4 325 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 ACMSDQ8TDX5 336 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 PIBF1Q8WXW3 757 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 SLC25A38Q96DW6 304 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 CMTM7Q96FZ5 175 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 PAGE5Q96GU1 130 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 SEC22AQ96IW7 307 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 C19orf24Q9BVV8 132 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 TEKT3Q9BXF9 490 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 PRORYQ9H606 182 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 SUDS3Q9H7L9 328 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-222ENST00000545308 GEMIN7Q9H840 131 aaKnown RBP3.05□□□□□ -1.92
SNHG1-222ENST00000545308 FOLH1BQ9HBA9 442 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 MARCH5Q9NX47 278 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 GCNT4Q9P109 453 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 PITPNC1Q9UKF7 332 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 HCFC1P51610 2035 aa3.05□□□□□ -1.92
SNHG1-222ENST00000545308 SMG1Q96Q15 3661 aaKnown RBP3.05□□□□□ -1.92
SNHG1-222ENST00000545308 TNRC6BQ9UPQ9 1833 aaKnown RBP3.05□□□□□ -1.92
SNHG1-222ENST00000545308 CREBBPQ92793 2442 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 AHCTF1Q8WYP5 2266 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 CACNA1DQ01668 2161 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 CFAP46Q8IYW2 2715 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 IGLV3-22A0A075B6J6 115 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 A0A1B0GUA9 196 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 TMEM110-MUSTN1A8MSY1 372 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 LSM1O15116 133 aaKnown RBP3.04□□□□□ -1.92
SNHG1-222ENST00000545308 CASC3O15234 703 aaKnown RBP3.04□□□□□ -1.92
SNHG1-222ENST00000545308 CCNE2O96020 404 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 GIG44P09565 113 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-222ENST00000545308 CCDC166P0CW27 439 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 GATA2P23769 480 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-222ENST00000545308 IL12AP29459 219 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 PEX19P40855 299 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 PLK1P53350 603 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 C21orf59P57076 290 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 BCL2L1Q07817 233 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 LAMTOR4Q0VGL1 99 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 GNMTQ14749 295 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 ARL6IP1Q15041 203 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 EOGTQ5NDL2 527 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 RNLSQ5VYX0 342 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 LRRC74BQ6ZQY2 392 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 DNM1P46Q6ZS02 220 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 STXBP4Q6ZWJ1 553 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 LUZP2Q86TE4 346 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 VRK2Q86Y07 508 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 PIANPQ8IYJ0 282 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 FTMTQ8N4E7 242 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 OR4C5Q8NGB2 326 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 OR13F1Q8NGS4 319 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 SLC22A8Q8TCC7 542 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 TCEAL3Q969E4 200 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 SLC38A4Q969I6 547 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 MED8Q96G25 268 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 CEP170P1Q96L14 293 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 MS4A4EQ96PG1 132 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 NEUROG2Q9H2A3 272 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 RNF167Q9H6Y7 350 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 RPRD1BQ9NQG5 326 aaKnown RBP3.04□□□□□ -1.92
SNHG1-222ENST00000545308 UXTQ9UBK9 157 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-222ENST00000545308 Q9UF83 564 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 FLVCR1Q9Y5Y0 555 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 MYO16Q9Y6X6 1858 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 COL12A1Q99715 3063 aa3.04□□□□□ -1.92
SNHG1-222ENST00000545308 TCHHQ07283 1943 aa3.03□□□□□ -1.92
SNHG1-222ENST00000545308 APC2O95996 2303 aa3.03□□□□□ -1.92
SNHG1-222ENST00000545308 TEX15Q9BXT5 2789 aa3.03□□□□□ -1.92
SNHG1-222ENST00000545308 ATMQ13315 3056 aa3.03□□□□□ -1.92
SNHG1-222ENST00000545308 IGHV1OR21-1A0A087WYE8 117 aa3.03□□□□□ -1.92
SNHG1-222ENST00000545308 NSG1A0A0A6YYJ2 146 aa3.03□□□□□ -1.92
SNHG1-222ENST00000545308 A0A0D9SFI3 127 aa3.03□□□□□ -1.92
SNHG1-222ENST00000545308 CCDC182A6NF36 153 aa3.03□□□□□ -1.92
SNHG1-222ENST00000545308 LOC110117498-PIK3R3F6TDL0 507 aa3.03□□□□□ -1.92
SNHG1-222ENST00000545308 H0YC42 278 aa3.03□□□□□ -1.92
SNHG1-222ENST00000545308 BOLA2-SMG1P6H3BVE0 249 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms