RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CD80P33681 288 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 ZNF133P52736 654 aaPredicted RBP10.79□□□□□ -0.68
USP28-212ENST00000544750 MELKQ14680 651 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 ZNF718Q3SXZ3 478 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 TMEM155Q4W5P6 130 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 THEM4Q5T1C6 240 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 SWT1Q5T5J6 900 aaKnown RBP10.79□□□□□ -0.68
USP28-212ENST00000544750 INTS11Q5TA45 600 aaKnown RBP10.79□□□□□ -0.68
USP28-212ENST00000544750 HIST2H2BDQ6DRA6 164 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 ERICH5Q6P6B1 374 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 HACD2Q6Y1H2 254 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 MICU2Q8IYU8 434 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 KLF14Q8TD94 323 aaPredicted RBP10.79□□□□□ -0.68
USP28-212ENST00000544750 GEMIN6Q8WXD5 167 aaKnown RBP10.79□□□□□ -0.68
USP28-212ENST00000544750 MCHR2Q969V1 340 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 DACT3Q96B18 629 aaPredicted RBP10.79□□□□□ -0.68
USP28-212ENST00000544750 POM121L2Q96KW2 1035 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 SEPHS2Q99611 448 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 MRPL13Q9BYD1 178 aaKnown RBP10.79□□□□□ -0.68
USP28-212ENST00000544750 MS4A7Q9GZW8 240 aaPredicted RBP10.79□□□□□ -0.68
USP28-212ENST00000544750 LRMDAQ9H2I8 198 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 MMP27Q9H306 513 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 EVA1AQ9H8M9 152 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 TMEM27Q9HBJ8 222 aa10.79□□□□□ -0.68
USP28-212ENST00000544750 KMT2CQ8NEZ4 4911 aaKnown RBP10.78□□□□□ -0.68
USP28-212ENST00000544750 LOC100509620A0A075B734 347 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 MGRN1O60291 552 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 ICMTO60725 284 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 FMO6PO60774 539 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 SBK2P0C263 348 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 TNFRSF1BP20333 461 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 PRDX6P30041 224 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 APLNRP35414 380 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 MTNR1AP48039 350 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 NUDT2P50583 147 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 SLC7A2P52569 658 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 NCALDP61601 193 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 PLP2Q04941 152 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 ZNF74Q16587 644 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 PABPC1L2AQ5JQF8 200 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 SPATA46Q5T0L3 261 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 SPATC1Q76KD6 591 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 ARPINQ7Z6K5 226 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 RANBP3LQ86VV4 465 aaPredicted RBP10.78□□□□□ -0.68
USP28-212ENST00000544750 JAZF1Q86VZ6 243 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 LRRC28Q86X40 367 aaPredicted RBP10.78□□□□□ -0.68
USP28-212ENST00000544750 PARP8Q8N3A8 854 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 SPICQ8N5J4 248 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 KIR3DL3Q8N743 410 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 ZNF283Q8N7M2 679 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 RBM15BQ8NDT2 890 aaKnown RBP10.78□□□□□ -0.68
USP28-212ENST00000544750 OR2T12Q8NG77 320 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 SLC25A40Q8TBP6 338 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 SIGLEC11Q96RL6 698 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 DIRC2Q96SL1 478 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 MCHR1Q99705 422 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 MRI1Q9BV20 369 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 OR2J1Q9GZK6 312 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 EGLN1Q9GZT9 426 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 PCDHAC1Q9H158 963 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 CYSLTR2Q9NS75 346 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 ABCD2Q9UBJ2 740 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 CGGBP1Q9UFW8 167 aaPredicted RBP10.78□□□□□ -0.68
USP28-212ENST00000544750 ZDHHC8Q9ULC8 765 aa10.78□□□□□ -0.68
USP28-212ENST00000544750 PLSCR5A0PG75 271 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 ELOVL7A1L3X0 281 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 CPSF4LA6NMK7 179 aaKnown RBP10.77□□□□□ -0.69
USP28-212ENST00000544750 GPANK1O95872 356 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 STOMP27105 288 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 LIPAP38571 399 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 KRTAP10-3P60369 221 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 RELBQ01201 579 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 LIPEQ05469 1076 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 ENTPD8Q5MY95 495 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 ZNF362Q5T0B9 420 aaPredicted RBP10.77□□□□□ -0.69
USP28-212ENST00000544750 C10orf128Q5T292 105 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 RFPL4BQ6ZWI9 263 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 LRRC18Q8N456 261 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 KLHL36Q8N4N3 616 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 C10orf53Q8N6V4 93 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 OR52E2Q8NGJ4 325 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 VANGL1Q8TAA9 524 aaPredicted RBP10.77□□□□□ -0.69
USP28-212ENST00000544750 NABP1Q96AH0 204 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 UPRTQ96BW1 309 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 DCLRE1CQ96SD1 692 aaKnown RBP10.77□□□□□ -0.69
USP28-212ENST00000544750 ZNF347Q96SE7 839 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 PKP2Q99959 881 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 EFCAB1Q9HAE3 211 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 MSL2Q9HCI7 577 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 TMEM106BQ9NUM4 274 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 SELENONQ9NZV5 590 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 SLC13A4Q9UKG4 626 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 ARL2BPQ9Y2Y0 163 aa10.77□□□□□ -0.69
USP28-212ENST00000544750 IGHV3OR16-10A0A075B7F0 116 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 MDFIC2A0A1B0GVS7 189 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 FAM181BA6NEQ2 426 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 H3BSA7 217 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 HOXA3O43365 443 aaPredicted RBP10.76□□□□□ -0.69
USP28-212ENST00000544750 CHP2O43745 196 aa10.76□□□□□ -0.69
USP28-212ENST00000544750 SHOX2O60902 331 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms