RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 TOXO94900 526 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 MPC2O95563 127 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 RAB3DO95716 219 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 ITGB2P05107 769 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 NR2C1P13056 603 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 MPZP25189 248 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 MAOBP27338 520 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 PTGS2P35354 604 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 MAGEB1P43366 347 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 RNF4P78317 190 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 ACY1Q03154 408 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 C11orf88Q6PI97 169 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 POMZP3Q6PJE2 187 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 GABRG1Q8N1C3 465 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 OR10H5Q8NGA6 315 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 OR13C3Q8NGS6 347 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 DUSP19Q8WTR2 217 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 MS4A3Q96HJ5 214 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 CMKLR1Q99788 373 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 UQCC2Q9BRT2 126 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 VN1R1Q9GZP7 353 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 MOB1AQ9H8S9 216 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 TMEM138Q9NPI0 162 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 MRPL22Q9NWU5 206 aaKnown RBP11.72□□□□□ -0.53
CPSF7-223ENST00000544669 KCNN3Q9UGI6 736 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 PFDN2Q9UHV9 154 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 OR52A1Q9UKL2 312 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 PPIEQ9UNP9 301 aaKnown RBP11.72□□□□□ -0.53
CPSF7-223ENST00000544669 LRP12Q9Y561 859 aa11.72□□□□□ -0.53
CPSF7-223ENST00000544669 ATG2BQ96BY7 2078 aa11.71□□□□□ -0.53
CPSF7-223ENST00000544669 NUP210LQ5VU65 1888 aa11.71□□□□□ -0.53
CPSF7-223ENST00000544669 F5P12259 2224 aa11.71□□□□□ -0.53
CPSF7-223ENST00000544669 A0A0D9SG52 128 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 TMEM272A0A1B0GTI8 110 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 FTCDNL1E5RQL4 147 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 G3V3Q6 166 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 EIF1AYO14602 144 aaKnown RBP11.71□□□□□ -0.54
CPSF7-223ENST00000544669 RPA2P15927 270 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 HSD11B1P28845 292 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 SSTR2P30874 369 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 EIF1AXP47813 144 aaKnown RBP11.71□□□□□ -0.54
CPSF7-223ENST00000544669 C4orf46Q504U0 113 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 NKAIN2Q5VXU1 208 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 FAHD2BQ6P2I3 314 aaPredicted RBP11.71□□□□□ -0.54
CPSF7-223ENST00000544669 TSSK4Q6SA08 328 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 RFPL4BQ6ZWI9 263 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 ADPRHL1Q8NDY3 354 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 SLC26A10Q8NG04 563 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 OR51S1Q8NGJ8 323 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 SLC25A28Q96A46 364 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 FAHD2AQ96GK7 314 aa11.71□□□□□ -0.54
CPSF7-223ENST00000544669 ELF4Q99607 663 aaPredicted RBP11.71□□□□□ -0.54
CPSF7-223ENST00000544669 RYDENQ9NUL5 291 aaKnown RBP11.71□□□□□ -0.54
CPSF7-223ENST00000544669 DHCR7Q9UBM7 475 aaKnown RBP11.71□□□□□ -0.54
CPSF7-223ENST00000544669 IGLV3-12A0A075B6K2 115 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 TMEM269A0A1B0GVZ9 245 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 ZNF736B4DX44 427 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-223ENST00000544669 KRBOX1C9JBD0 128 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 ETV2O00321 342 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-223ENST00000544669 CD74P04233 296 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 H2BFMP0C1H6 154 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 CTLA4P16410 223 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 RPS15P62841 145 aaKnown RBP11.7□□□□□ -0.54
CPSF7-223ENST00000544669 POU4F3Q15319 338 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 AANATQ16613 207 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 WDR45BQ5MNZ6 344 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 GLYATL3Q5SZD4 288 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 OR7E24Q6IFN5 339 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 RHBDD2Q6NTF9 364 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 TMEM65Q6PI78 240 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 CHRDL2Q6WN34 429 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 SLC35D2Q76EJ3 337 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 SLC51BQ86UW2 128 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 C12orf45Q8N5I9 185 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-223ENST00000544669 DTWD2Q8NBA8 298 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 OR51A4Q8NGJ6 313 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 OR10AC1Q8NH08 325 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 RLN3Q8WXF3 142 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 ASB10Q8WXI3 467 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 GCDHQ92947 438 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-223ENST00000544669 RBPMSQ93062 196 aaKnown RBP11.7□□□□□ -0.54
CPSF7-223ENST00000544669 SHDQ96IW2 340 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 MRGPRX4Q96LA9 322 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 PHF7Q9BWX1 381 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-223ENST00000544669 ULBP3Q9BZM4 244 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 ZNF768Q9H5H4 540 aaKnown RBP11.7□□□□□ -0.54
CPSF7-223ENST00000544669 CHST11Q9NPF2 352 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 ALKBH4Q9NXW9 302 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 SLC2A8Q9NY64 477 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 RDH8Q9NYR8 311 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 RPH3AQ9Y2J0 694 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-223ENST00000544669 COA3Q9Y2R0 106 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-223ENST00000544669 A0A1B0GTH9 108 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 TMEM82A0PJX8 343 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 C4orf47A7E2U8 309 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 BPNT1O95861 308 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 PLGP00747 810 aaPredicted RBP11.7□□□□□ -0.54
CPSF7-223ENST00000544669 PNLIPP16233 465 aa11.7□□□□□ -0.54
CPSF7-223ENST00000544669 SMAD4Q13485 552 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms