RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 LYPD4Q6UWN0 246 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SEZ6L2Q6UXD5 910 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 GID4Q8IVV7 300 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 TRUB1Q8WWH5 349 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZMYND19Q96E35 227 aaPredicted RBP12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PIK3IP1Q96FE7 263 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ADI1Q9BV57 179 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 NOX3Q9HBY0 568 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 RASSF1Q9NS23 344 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MRPL22Q9NWU5 206 aaKnown RBP12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ASH2LQ9UBL3 628 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 TIMM10BQ9Y5J6 103 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PRR14LQ5THK1 2151 aa12.62□□□□□ -0.39
TNFRSF1A-216ENST00000543995 TMCC2O75069 709 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 IGKV3-15P01624 115 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MMP7P09237 267 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SPARCP09486 303 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SLC2A5P22732 501 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 GSTT1P30711 240 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 BSPH1Q075Z2 132 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SCRN3Q0VDG4 424 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 RAB39AQ14964 217 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 B3GLCTQ6Y288 498 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SYT9Q86SS6 491 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ERI1Q8IV48 349 aaKnown RBP12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 LINC00346Q8IVM7 164 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 OR2AJ1Q8NGZ0 328 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 KCNS3Q9BQ31 491 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 WACQ9BTA9 647 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 WDR76Q9H967 626 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 DNAJC27Q9NZQ0 273 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 FBXL3Q9UKT7 428 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 COMMD3-BMI1R4GMX3 469 aa12.61□□□□□ -0.39
TNFRSF1A-216ENST00000543995 IGHV1-18A0A0C4DH31 117 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 IQCMA0A1B0GVH7 501 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 A6NNC1 897 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 DEFB108AA8MXU0 73 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 H0YAE9 185 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 H0YJX3 145 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MPZL2O60487 215 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CLIC3O95833 236 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CELA3BP08861 270 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PTAFRP25105 342 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CAPGP40121 348 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 VHLP40337 213 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ENTPD1P49961 510 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 NR1H2P55055 460 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CDH11P55287 796 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PSG4Q00888 419 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 IL5RAQ01344 420 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PABPC1L2AQ5JQF8 200 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 AADACL4Q5VUY2 407 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZNF787Q6DD87 383 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CORO6Q6QEF8 472 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 IZUMO2Q6UXV1 221 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MEPCEQ7L2J0 689 aaKnown RBP12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ENTHD1Q8IYW4 607 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ALDH16A1Q8IZ83 802 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PIAS4Q8N2W9 510 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 FAM169BQ8N8A8 192 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 OR6N2Q8NGY6 317 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MS4A3Q96HJ5 214 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 INTS14Q96SY0 518 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 TEAD3Q99594 435 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 OR2H1Q9GZK4 316 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CRNNQ9UBG3 495 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 KCNG2Q9UJ96 466 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 LHFPL6Q9Y693 200 aa12.6□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CCDC182A6NF36 153 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 DPRXA6NFQ7 191 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SLC22A31A6NKX4 558 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZNF593O00488 134 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ABCD4O14678 606 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SIAH2O43255 324 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SGCEO43556 437 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SELENOFO60613 162 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PTHP01270 115 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 IGLV1-44P01699 117 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SERPINA5P05154 406 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CD3EP07766 207 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CECR9P0C854 216 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CD40P25942 277 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 RPS27P42677 84 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SNRPGP62308 76 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ADARB1P78563 741 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 C3orf36Q3SXR2 165 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 NCMAPQ5T1S8 102 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZNF691Q5VV52 312 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MEDAGQ5VYS4 303 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 TMEM154Q6P9G4 183 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 MYPOPQ86VE0 399 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 SETD9Q8NE22 299 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 GJC3Q8NFK1 279 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 AKR7LQ8NHP1 331 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 RFKQ969G6 155 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 ZNF582Q96NG8 517 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 HEATR1Q9H583 2144 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 CLN6Q9NWW5 311 aa12.59□□□□□ -0.39
TNFRSF1A-216ENST00000543995 PLEK2Q9NYT0 353 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms