RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CPEB3Q8NE35 698 aaKnown RBP13.08□□□□□ -0.32
CD9-210ENST00000543916 PROKR2Q8NFJ6 384 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 OR2T4Q8NH00 348 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 SLC29A1Q99808 456 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 KCNS3Q9BQ31 491 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 C9orf16Q9BUW7 83 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 OR2H1Q9GZK4 316 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 RIBC2Q9H4K1 309 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 HINT3Q9NQE9 182 aaKnown RBP13.08□□□□□ -0.32
CD9-210ENST00000543916 MRPL22Q9NWU5 206 aaKnown RBP13.08□□□□□ -0.32
CD9-210ENST00000543916 TVP23BQ9NYZ1 205 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 ST6GALNAC2Q9UJ37 374 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 FBXL3Q9UKT7 428 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 ATP23Q9Y6H3 246 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 TVP23AA6NH52 213 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 M0R129 80 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 CCL2P13500 99 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 ZNF35P13682 527 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 APEX1P27695 318 aaKnown RBP13.07□□□□□ -0.32
CD9-210ENST00000543916 ALDH3A2P51648 485 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 PCBD1P61457 104 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 TEKQ02763 1124 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 HGFACQ04756 655 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 AQP6Q13520 282 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 C12orf73Q69YU5 71 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 ZNF774Q6NX45 483 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 PLBD1Q6P4A8 553 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 SYT9Q86SS6 491 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 CDH24Q86UP0 819 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 DEPDC4Q8N2C3 294 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 PAQR4Q8N4S7 273 aaPredicted RBP13.07□□□□□ -0.32
CD9-210ENST00000543916 ZNF611Q8N823 705 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 SLC30A7Q8NEW0 376 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 PTP4A1Q93096 173 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 FBXW5Q969U6 566 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 OTULINQ96BN8 352 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 CISD1Q9NZ45 108 aaKnown RBP13.07□□□□□ -0.32
CD9-210ENST00000543916 ASH2LQ9UBL3 628 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 ENOPH1Q9UHY7 261 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 POU2F3Q9UKI9 436 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 PLEKHA6Q9Y2H5 1048 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 TIMM10BQ9Y5J6 103 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 LHFPL6Q9Y693 200 aa13.07□□□□□ -0.32
CD9-210ENST00000543916 HEATR1Q9H583 2144 aaKnown RBP13.07□□□□□ -0.32
CD9-210ENST00000543916 ANKRD17O75179 2603 aaKnown RBP13.06□□□□□ -0.32
CD9-210ENST00000543916 IQCMA0A1B0GVH7 501 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 PRR23D1E9PI22 279 aaPredicted RBP13.06□□□□□ -0.32
CD9-210ENST00000543916 PRKYO43930 277 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 ATE1O95260 518 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 HLA-DQA2P01906 255 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 PRR23D2P0DMB1 279 aaPredicted RBP13.06□□□□□ -0.32
CD9-210ENST00000543916 PSKH1P11801 424 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 PLP2Q04941 152 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 SNAPC1Q16533 368 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 LINC01590Q5TEZ4 76 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 ZBTB49Q6ZSB9 765 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 CPOQ8IVL8 374 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 ZNF511Q8NB15 262 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 BBS1Q8NFJ9 593 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 IL17RDQ8NFM7 739 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 EME1Q96AY2 570 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 PLEKHA8Q96JA3 519 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 WACQ9BTA9 647 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 TEX12Q9BXU0 123 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 POLR1DQ9Y2S0 133 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 COMMD3-BMI1R4GMX3 469 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 ABCA4P78363 2273 aa13.06□□□□□ -0.32
CD9-210ENST00000543916 CADP27708 2225 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 POLQO75417 2590 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 LOC100509620A0A075B734 347 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 RER1O15258 196 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 DOK2O60496 412 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 PTHP01270 115 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 RAF1P04049 648 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 CD53P19397 219 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 PAICSP22234 425 aaKnown RBP13.05□□□□□ -0.32
CD9-210ENST00000543916 STOMP27105 288 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 GGT2P36268 569 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 RPS27P42677 84 aaKnown RBP13.05□□□□□ -0.32
CD9-210ENST00000543916 RAD23AP54725 363 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 HIST1H3AP68431 136 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 SCRN3Q0VDG4 424 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 TBC1D28Q2M2D7 210 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 ZIK1Q3SY52 487 aaPredicted RBP13.05□□□□□ -0.32
CD9-210ENST00000543916 CCDC92Q53HC0 331 aaPredicted RBP13.05□□□□□ -0.32
CD9-210ENST00000543916 HIST2H3PS2Q5TEC6 136 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 KRT80Q6KB66 452 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 SLC18B1Q6NT16 456 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 CORO6Q6QEF8 472 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 C20orf204Q6ZNR8 217 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 HIST2H3AQ71DI3 136 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 VASH1Q7L8A9 365 aaPredicted RBP13.05□□□□□ -0.32
CD9-210ENST00000543916 CXXC5Q7LFL8 322 aaKnown RBP13.05□□□□□ -0.32
CD9-210ENST00000543916 LINC00346Q8IVM7 164 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 OR10H5Q8NGA6 315 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 OR6K6Q8NGW6 343 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 IGFBPL1Q8WX77 278 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 POM121L2Q96KW2 1035 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 MBOAT4Q96T53 435 aa13.05□□□□□ -0.32
CD9-210ENST00000543916 OR51V1Q9H2C8 321 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms