RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 POP5Q969H6 163 aaKnown RBP16.41■□□□□ 0.22
SPPL3-208ENST00000543854 ASB9Q96DX5 294 aa16.41■□□□□ 0.22
SPPL3-208ENST00000543854 POM121L2Q96KW2 1035 aa16.41■□□□□ 0.22
SPPL3-208ENST00000543854 WACQ9BTA9 647 aa16.41■□□□□ 0.22
SPPL3-208ENST00000543854 ZNF416Q9BWM5 594 aa16.41■□□□□ 0.22
SPPL3-208ENST00000543854 WNT5BQ9H1J7 359 aa16.41■□□□□ 0.22
SPPL3-208ENST00000543854 C1orf21Q9H246 121 aa16.41■□□□□ 0.22
SPPL3-208ENST00000543854 EMC7Q9NPA0 242 aa16.41■□□□□ 0.22
SPPL3-208ENST00000543854 MYEF2Q9P2K5 600 aaKnown RBP16.41■□□□□ 0.22
SPPL3-208ENST00000543854 EIF3KQ9UBQ5 218 aaKnown RBP16.41■□□□□ 0.22
SPPL3-208ENST00000543854 VWC2LB2RUY7 222 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 TNFRSF11BO00300 401 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 TLX2O43763 284 aaPredicted RBP16.4■□□□□ 0.22
SPPL3-208ENST00000543854 KHDRBS3O75525 346 aaKnown RBP16.4■□□□□ 0.22
SPPL3-208ENST00000543854 TXNDC12O95881 172 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 IGFBP1P08833 259 aaPredicted RBP16.4■□□□□ 0.22
SPPL3-208ENST00000543854 NR4A2P43354 598 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 GSSP48637 474 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 ERVS71-1P61550 626 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 GGTLC2Q14390 218 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 MAD2L1BPQ15013 274 aaPredicted RBP16.4■□□□□ 0.22
SPPL3-208ENST00000543854 RFX4Q33E94 735 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 KRTAP21-3Q3LHN1 58 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 FAM98BQ52LJ0 330 aaKnown RBP16.4■□□□□ 0.22
SPPL3-208ENST00000543854 C1orf94Q6P1W5 598 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 PGBD2Q6P3X8 592 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 DNM1P34Q6PK57 102 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 JAZF1Q86VZ6 243 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 GLB1L2Q8IW92 636 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 ZNF540Q8NDQ6 660 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 OR1J1Q8NGS3 322 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 SYNPRQ8TBG9 265 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 GNPDA2Q8TDQ7 276 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 LRGUKQ96M69 825 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 FOXN4Q96NZ1 517 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 ERMAPQ96PL5 475 aaPredicted RBP16.4■□□□□ 0.22
SPPL3-208ENST00000543854 IFT27Q9BW83 186 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 TRIM15Q9C019 465 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 GPR160Q9UJ42 338 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 NDRG4Q9ULP0 352 aaKnown RBP16.4■□□□□ 0.22
SPPL3-208ENST00000543854 LYVE1Q9Y5Y7 322 aa16.4■□□□□ 0.22
SPPL3-208ENST00000543854 LOC100509620A0A075B734 347 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 IMPA2O14732 288 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 ZNF250P15622 560 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 TSPAN31Q12999 210 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 ZNF774Q6NX45 483 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 UGT2A3Q6UWM9 527 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 ZNF620Q6ZNG0 422 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 PTCHD4Q6ZW05 846 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 LINC00471Q8N535 108 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 UBASH3BQ8TF42 649 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 SNX33Q8WV41 574 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 BPESC1Q9GZL8 116 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 TAS2R1Q9NYW7 299 aa16.39■□□□□ 0.21
SPPL3-208ENST00000543854 CHD3Q12873 2000 aaKnown RBP16.39■□□□□ 0.21
SPPL3-208ENST00000543854 SONP18583 2426 aaKnown RBP16.38■□□□□ 0.21
SPPL3-208ENST00000543854 IGLV3-9A0A075B6K5 115 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 ARPC3O15145 178 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 DOK2O60496 412 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 RENP00797 406 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 SCG5P05408 212 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 NOS3P29474 1203 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 CRABP1P29762 137 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 WNT5AP41221 380 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 HMGA2P52926 109 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 MS4A2Q01362 244 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 AQP6Q13520 282 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 RPL13AP3Q6NVV1 102 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 ZNF101Q8IZC7 436 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 ZNF786Q8N393 782 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 OR9Q2Q8NGE9 314 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 OR52L1Q8NGH7 329 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 CLPTM1LQ96KA5 538 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 SAMD8Q96LT4 415 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 THTPAQ9BU02 230 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 NUAK2Q9H093 628 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 YAE1D1Q9NRH1 226 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 SLCO1C1Q9NYB5 712 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 TAAR3PQ9P1P4 343 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 COA3Q9Y2R0 106 aaPredicted RBP16.38■□□□□ 0.21
SPPL3-208ENST00000543854 POLR1DQ9Y2S0 133 aa16.38■□□□□ 0.21
SPPL3-208ENST00000543854 SGCEO43556 437 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 CCNB2O95067 398 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 CLPTM1O96005 669 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 MT-ND5P03915 603 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 NAT2P11245 290 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 GIFP27352 417 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 CDKN2AP42771 156 aaKnown RBP16.37■□□□□ 0.21
SPPL3-208ENST00000543854 HTR5AP47898 357 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 LSM6P62312 80 aaKnown RBP16.37■□□□□ 0.21
SPPL3-208ENST00000543854 ALKBH6Q3KRA9 238 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 DNAL1Q4LDG9 190 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 C6orf52Q5T4I8 152 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 LEG1Q6P5S2 330 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 PGM2L1Q6PCE3 622 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 ARL9Q6T311 187 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 RFPL4BQ6ZWI9 263 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 C1orf174Q8IYL3 243 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 OR4C15Q8NGM1 316 aa16.37■□□□□ 0.21
SPPL3-208ENST00000543854 ABHD4Q8TB40 342 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms