RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	CITED4	Q96RK1	184 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	SDF2	Q99470	211 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	MGLL	Q99685	303 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	SOST	Q9BQB4	213 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	MARVELD1	Q9BSK0	173 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	DUSP26	Q9BV47	211 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	PRR14	Q9BWN1	585 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	ASPN	Q9BXN1	380 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	SRXN1	Q9BYN0	137 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	BARHL1	Q9BZE3	327 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	SAP130	Q9H0E3	1048 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.65	□□□□□ -1.5
CIT-213	ENST00000543324	TIGAR	Q9NQ88	270 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	C12orf4	Q9NQ89	552 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	RBFOX1	Q9NWB1	397 aa	Known RBP	5.65	□□□□□ -1.5
CIT-213	ENST00000543324	THUMPD1	Q9NXG2	353 aa	Known RBP	5.65	□□□□□ -1.5
CIT-213	ENST00000543324	ZNF226	Q9NYT6	803 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	AASS	Q9UDR5	926 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	NDRG3	Q9UGV2	375 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	FBXO9	Q9UK97	447 aa	Predicted RBP	5.65	□□□□□ -1.5
CIT-213	ENST00000543324	RABL2B	Q9UNT1	228 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	LSM2	Q9Y333	95 aa	Known RBP	5.65	□□□□□ -1.5
CIT-213	ENST00000543324	ALG5	Q9Y673	324 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	FKBP7	Q9Y680	259 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324		U3KQV3	271 aa		5.65	□□□□□ -1.5
CIT-213	ENST00000543324	NPIPA5	A0A0B4J1W7	369 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	PRAMEF27	A3QJZ7	478 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	NPIPA7	E9PJI5	369 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	SCD	O00767	359 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	EIF1AY	O14602	144 aa	Known RBP	5.64	□□□□□ -1.51
CIT-213	ENST00000543324	TNFSF11	O14788	317 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	MYL12B	O14950	172 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	PLA2G10	O15496	165 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	CXCL13	O43927	109 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	EIF4E2	O60573	245 aa	Known RBP	5.64	□□□□□ -1.51
CIT-213	ENST00000543324	AK1	P00568	194 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	C1QC	P02747	245 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	NPIPA8	P0DM63	369 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	POU2F1	P14859	743 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	PPP3CB	P16298	524 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	MYL12A	P19105	171 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	RPS4Y1	P22090	263 aa	Known RBP	5.64	□□□□□ -1.51
CIT-213	ENST00000543324	ENPP1	P22413	925 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	PPIB	P23284	216 aa	Known RBP	5.64	□□□□□ -1.51
CIT-213	ENST00000543324	EPHA2	P29317	976 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	RPS19	P39019	145 aa	Known RBP	5.64	□□□□□ -1.51
CIT-213	ENST00000543324	CRYBB2	P43320	205 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	EIF1AX	P47813	144 aa	Known RBP	5.64	□□□□□ -1.51
CIT-213	ENST00000543324	RFX3	P48380	749 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	RPS26	P62854	115 aa	Known RBP	5.64	□□□□□ -1.51
CIT-213	ENST00000543324	PPP3R1	P63098	170 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	SIRPA	P78324	504 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	CD83	Q01151	205 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	ST3GAL4	Q11206	333 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	MLLT11	Q13015	90 aa	Predicted RBP	5.64	□□□□□ -1.51
CIT-213	ENST00000543324	TP53BP2	Q13625	1128 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	TAB1	Q15750	504 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	NDUFAF6	Q330K2	333 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	ARHGAP11B	Q3KRB8	267 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	HSD17B12	Q53GQ0	312 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	ABLIM2	Q6H8Q1	611 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	FAM166A	Q6J272	317 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	PLET1	Q6UQ28	207 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF550	Q7Z398	422 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	P4HA3	Q7Z4N8	544 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	GPAT4	Q86UL3	456 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	CLECL1	Q8IZS7	167 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	ZNF527	Q8NB42	609 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	OR4M2	Q8NGB6	313 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	OR5D16	Q8NGK9	328 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	OR4C15	Q8NGM1	316 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	OR10Z1	Q8NGY1	313 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	OR5W2	Q8NH69	310 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	OR5AK3P	Q8NH89	298 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	ABHD3	Q8WU67	409 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	GIMAP1	Q8WWP7	306 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	CPNE4	Q96A23	557 aa	Predicted RBP	5.64	□□□□□ -1.51
CIT-213	ENST00000543324	SLC25A46	Q96AG3	418 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	NEURL3	Q96EH8	262 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	RADIL	Q96JH8	1075 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	HSH2D	Q96JZ2	352 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	OR52E6	Q96RD3	313 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	KCNS3	Q9BQ31	491 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	MMP28	Q9H239	520 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	MIXL1	Q9H2W2	232 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	RNF167	Q9H6Y7	350 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	RANBP3	Q9H6Z4	567 aa	Predicted RBP	5.64	□□□□□ -1.51
CIT-213	ENST00000543324	BCO1	Q9HAY6	547 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	SLC25A19	Q9HC21	320 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	EMC7	Q9NPA0	242 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	ISYNA1	Q9NPH2	558 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	POLE3	Q9NRF9	147 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	MED9	Q9NWA0	146 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	NDUFB11	Q9NX14	153 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	KLHL28	Q9NXS3	571 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	KLHL13	Q9P2N7	655 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	MCTS1	Q9ULC4	181 aa	Known RBP	5.64	□□□□□ -1.51
CIT-213	ENST00000543324	PROCR	Q9UNN8	238 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	CORO2B	Q9UQ03	480 aa		5.64	□□□□□ -1.51
CIT-213	ENST00000543324	EMC9	Q9Y3B6	208 aa		5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms