RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 TBC1D21Q8IYX1 336 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 PDIK1LQ8N165 341 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 NECAP1Q8NC96 275 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 OR10J6PQ8NGY7 276 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 SLC7A13Q8TCU3 470 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 LRRC29Q8WV35 223 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 FLYWCH2Q96CP2 140 aaKnown RBP1.22□□□□□ -2.21
KNTC1-213ENST00000542727 CCDC126Q96EE4 140 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 PKNOX2Q96KN3 472 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 RNF157Q96PX1 679 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 OR5B12Q96R08 314 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 CAMK2N2Q96S95 79 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 GCOM2Q9BZD3 368 aaPredicted RBP1.22□□□□□ -2.21
KNTC1-213ENST00000542727 ULBP2Q9BZM5 246 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 FBXO6Q9NRD1 293 aaPredicted RBP1.22□□□□□ -2.21
KNTC1-213ENST00000542727 TRMT112Q9UI30 125 aaKnown RBP1.22□□□□□ -2.21
KNTC1-213ENST00000542727 ING4Q9UNL4 249 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 TMED5Q9Y3A6 229 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 GOLT1BQ9Y3E0 138 aa1.22□□□□□ -2.21
KNTC1-213ENST00000542727 KANK1Q14678 1352 aa1.21□□□□□ -2.21
KNTC1-213ENST00000542727 IGLV3-12A0A075B6K2 115 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 L7N2F9 121 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 CPLX1O14810 134 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 RDH16O75452 317 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 RP2O75695 350 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 OR5H8P0DN80 308 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 TNNI1P19237 187 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 CELP19835 753 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 CEACAM3P40198 252 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 AQP2P41181 271 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 KIR3DL2P43630 455 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 RND2P52198 227 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 VSX2P58304 361 aaPredicted RBP1.21□□□□□ -2.22
KNTC1-213ENST00000542727 PLP1P60201 277 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 UBE2NP61088 152 aaKnown RBP1.21□□□□□ -2.22
KNTC1-213ENST00000542727 MXD1Q05195 221 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 CDC20Q12834 499 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 CDH17Q12864 832 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 PON2Q15165 354 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 VPS26BQ4G0F5 336 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 KRTAP13-2Q52LG2 175 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 ORMDL2Q53FV1 153 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 CTSL3PQ5NE16 218 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 ZFP1Q6P2D0 407 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 KDELC1Q6UW63 502 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 FBXW12Q6X9E4 464 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 RUFY3Q7L099 469 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 NIPA1Q7RTP0 329 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 OSR2Q8N2R0 312 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 MS4A15Q8N5U1 240 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 METTL13Q8N6R0 699 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 NOXO1Q8NFA2 376 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 OR4K5Q8NGD3 323 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 PIFOQ8TCI5 191 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 NARS2Q96I59 477 aaKnown RBP1.21□□□□□ -2.22
KNTC1-213ENST00000542727 TIMM17AQ99595 171 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 DOK1Q99704 481 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 ATP5SQ99766 215 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 TIMM29Q9BSF4 260 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 CRACR2AQ9BSW2 395 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 SPNS1Q9H2V7 528 aa1.21□□□□□ -2.22
KNTC1-213ENST00000542727 UBE2ZQ9H832 354 aaPredicted RBP1.21□□□□□ -2.22
KNTC1-213ENST00000542727 DDX19AQ9NUU7 478 aaKnown RBP1.21□□□□□ -2.22
KNTC1-213ENST00000542727 MARCOQ9UEW3 520 aaPredicted RBP1.21□□□□□ -2.22
KNTC1-213ENST00000542727 LSM7Q9UK45 103 aaKnown RBP1.21□□□□□ -2.22
KNTC1-213ENST00000542727 COL5A1P20908 1838 aaPredicted RBP1.21□□□□□ -2.22
KNTC1-213ENST00000542727 SHANK1Q9Y566 2161 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 ATAD2BQ9ULI0 1458 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 A0A1W2PPE3 182 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 C5orf63A6NC05 138 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 OR6C74A6NCV1 312 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF850A8MQ14 1090 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 CDC7O00311 574 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 AIM2O14862 343 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 EEDO75530 441 aaKnown RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 IGHDP01880 384 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 HLA-DQA1P01909 254 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 APCSP02743 223 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 IGKV4-1P06312 121 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 EIF4EP06730 217 aaKnown RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 ANXA5P08758 320 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 PABPC4LP0CB38 370 aaKnown RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 CCNB1P14635 433 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 SSTR5P35346 364 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 OPRK1P41145 380 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 CRYBB2P43320 205 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 SSR4P51571 173 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 CCNHP51946 323 aaPredicted RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 CCNG1P51959 295 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 CDKN2DP55273 166 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 SLC25A11Q02978 314 aaKnown RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 BST2Q10589 180 aaKnown RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 SF3A2Q15428 464 aaKnown RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 MAJINQ3KP22 176 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 PRR9Q5T870 116 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 PRAMEF5Q5TYX0 476 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 PRAMEF6Q5VXH4 476 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 RNASEKQ6P5S7 137 aaKnown RBP1.2□□□□□ -2.22
KNTC1-213ENST00000542727 TMEM205Q6UW68 189 aa1.2□□□□□ -2.22
KNTC1-213ENST00000542727 EGFL6Q8IUX8 553 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms