RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 LAMTOR5O43504 91 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 OR2J2O76002 312 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 ALX3O95076 343 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 IGHG1P01857 330 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 P04436 131 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 CLDN6P56747 220 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 ZNF117Q03924 483 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 HAGHLQ6PII5 290 aaPredicted RBP14.59□□□□□ -0.07
VARS2-212ENST00000542001 CD300LDQ6UXZ3 194 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 ULBP2Q9BZM5 246 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 HRH4Q9H3N8 390 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 MEMO1Q9Y316 297 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 TMEM229AB2RXF0 380 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 FADS1O60427 444 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 EPPINO95925 133 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 HPXP02790 462 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 GAAP10253 952 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 LIMS1P48059 325 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 LUMP51884 338 aaPredicted RBP14.59□□□□□ -0.07
VARS2-212ENST00000542001 SNRPNP63162 240 aaKnown RBP14.59□□□□□ -0.07
VARS2-212ENST00000542001 EXOSC2Q13868 293 aaKnown RBP14.59□□□□□ -0.07
VARS2-212ENST00000542001 KIF26BQ2KJY2 2108 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 OR52W1Q6IF63 320 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 WDFY2Q96P53 400 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 ISYNA1Q9NPH2 558 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 CHRNA9Q9UGM1 479 aa14.59□□□□□ -0.07
VARS2-212ENST00000542001 CXorf51AA0A1B0GTR3 108 aa14.58□□□□□ -0.07
VARS2-212ENST00000542001 HOXB9P17482 250 aaPredicted RBP14.58□□□□□ -0.07
VARS2-212ENST00000542001 BLVRBP30043 206 aaPredicted RBP14.58□□□□□ -0.07
VARS2-212ENST00000542001 BDKRB2P30411 391 aa14.58□□□□□ -0.07
VARS2-212ENST00000542001 ZNF93P35789 620 aaPredicted RBP14.58□□□□□ -0.07
VARS2-212ENST00000542001 P2RX1P51575 399 aa14.58□□□□□ -0.07
VARS2-212ENST00000542001 SLC26A5P58743 744 aa14.58□□□□□ -0.07
VARS2-212ENST00000542001 C17orf67Q0P5P2 114 aa14.58□□□□□ -0.07
VARS2-212ENST00000542001 GK2Q14410 553 aaPredicted RBP14.58□□□□□ -0.07
VARS2-212ENST00000542001 SPAG16Q8N0X2 631 aa14.58□□□□□ -0.07
VARS2-212ENST00000542001 ZNF565Q8N9K5 539 aa14.58□□□□□ -0.07
VARS2-212ENST00000542001 OR4C16Q8NGL9 310 aa14.58□□□□□ -0.07
VARS2-212ENST00000542001 POFUT1Q9H488 388 aa14.58□□□□□ -0.07
VARS2-212ENST00000542001 MYLKQ15746 1914 aa14.58□□□□□ -0.07
VARS2-212ENST00000542001 A6NIZ1 184 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 PLPP2O43688 288 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 FCGR2AP12318 317 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 EDN3P14138 238 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 RAP1BP61224 184 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 RAP1AP62834 184 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 MFSD13AQ14CX5 517 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 MANEAQ5SRI9 462 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 PRSS27Q9BQR3 290 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 SLC5A7Q9GZV3 580 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 ZIC2O95409 532 aaPredicted RBP14.58□□□□□ -0.08
VARS2-212ENST00000542001 ADRB1P08588 477 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 VAMP2P63027 116 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 C1orf53Q5VUE5 145 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 CREB3L2Q70SY1 520 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 ZNF611Q8N823 705 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 OR4K15Q8NH41 348 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 PIGCQ92535 297 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 CDC6Q99741 560 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 PISDQ9UG56 409 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 SRPK3Q9UPE1 567 aa14.58□□□□□ -0.08
VARS2-212ENST00000542001 H0YIG0 161 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 S100A9P06702 114 aaKnown RBP14.57□□□□□ -0.08
VARS2-212ENST00000542001 SEC61A1P61619 476 aaKnown RBP14.57□□□□□ -0.08
VARS2-212ENST00000542001 WDR38Q5JTN6 314 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 ZNF362Q5T0B9 420 aaPredicted RBP14.57□□□□□ -0.08
VARS2-212ENST00000542001 CD276Q5ZPR3 534 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 GLIPR1L1Q6UWM5 242 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 OVCH1Q7RTY7 1134 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 ZNF454Q8N9F8 522 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 C10orf90Q96M02 699 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 TINAGL1Q9GZM7 467 aaPredicted RBP14.57□□□□□ -0.08
VARS2-212ENST00000542001 GAREM1Q9H706 876 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 PRSS37A4D1T9 235 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 CD79AP11912 226 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 DPP4P27487 766 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 ABCD3P28288 659 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 GLP1RP43220 463 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 NPSR1Q6W5P4 371 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 GRINAQ7Z429 371 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 ZNF687Q8N1G0 1237 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 SYS1Q8N2H4 156 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 BHLHE23Q8NDY6 225 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 RHBDD1Q8TEB9 315 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 C7orf50Q9BRJ6 194 aaKnown RBP14.57□□□□□ -0.08
VARS2-212ENST00000542001 POLE3Q9NRF9 147 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 OR5V1Q9UGF6 321 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 MRPS28Q9Y2Q9 187 aaKnown RBP14.57□□□□□ -0.08
VARS2-212ENST00000542001 LOC100289279A0A1B0GTE1 492 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 DCTN6O00399 190 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 SSX5O60225 188 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 GUSBP08236 651 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 FOSL2P15408 326 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 CTLA4P16410 223 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 NUDT1P36639 197 aa14.57□□□□□ -0.08
VARS2-212ENST00000542001 RPL35P42766 123 aaKnown RBP14.57□□□□□ -0.08
VARS2-212ENST00000542001 DCDP81605 110 aaKnown RBP14.57□□□□□ -0.08
VARS2-212ENST00000542001 H1FNTQ75WM6 255 aaPredicted RBP14.57□□□□□ -0.08
VARS2-212ENST00000542001 YRDCQ86U90 279 aaKnown RBP14.57□□□□□ -0.08
VARS2-212ENST00000542001 TMEM59Q9BXS4 323 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms