RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 CST11Q9H112 138 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 PRTFDC1Q9NRG1 225 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 PLCL2Q9UPR0 1127 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 EMC9Q9Y3B6 208 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 MYO7BQ6PIF6 2116 aa9.33□□□□□ -0.92
CDC42SE1-207ENST00000540998 A0A0J9YY10 115 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 HCRTR2O43614 444 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 ITGB2P05107 769 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 ASAH2BP0C7U1 165 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 MAPK3P27361 379 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 DLSTP36957 453 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 GMFBP60983 142 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 SKP2Q13309 424 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 PPP1R1AQ13522 171 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 TMEM225Q6GV28 225 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 DNM1P46Q6ZS02 220 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 HSD17B13Q7Z5P4 300 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZFP82Q8N141 532 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 EID2Q8N6I1 236 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR4D6Q8NGJ1 314 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR2I1PQ8NGU4 316 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 GPX8Q8TED1 209 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 HERVK_113Q902F9 699 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 DCBLD2Q96PD2 775 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 HPF1Q9NWY4 346 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 SLC39A1Q9NY26 324 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 PCDHB10Q9UN67 800 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 RABL2BQ9UNT1 228 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 LOC100289279A0A1B0GTE1 492 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 C13orf42A0A1B0GVH6 325 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 A0A1W2PPC1 479 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 TUBAL3A6NHL2 446 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 METTL12A8MUP2 240 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 CDC40O60508 579 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 ICOSLGO75144 302 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 AKR1C4P17516 323 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 CD34P28906 385 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 ADAM8P78325 824 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 MRPS10P82664 201 aaKnown RBP9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 CDNFQ49AH0 187 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 KLHL26Q53HC5 615 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 TAF8Q7Z7C8 310 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 PUSL1Q8N0Z8 303 aaKnown RBP9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 SDR16C5Q8N3Y7 309 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 C2CD4CQ8TF44 421 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 SLC25A44Q96H78 314 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 MAP3K3Q99759 626 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 SEMA6CQ9H3T2 930 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 SFXN1Q9H9B4 322 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 PCDHB16Q9NRJ7 776 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 RASL12Q9NYN1 266 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 TMEM212A6NML5 194 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 EFCAB7A8K855 629 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 FADS1O60427 444 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 CD1AP06126 327 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 RPA2P15927 270 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 ANOS1P23352 680 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 CAPZA2P47755 286 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 OR1D4P47884 311 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 GPM6BQ13491 265 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 AKIRIN2Q53H80 203 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 TMEM184AQ6ZMB5 413 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 MCATQ8IVS2 390 aaKnown RBP9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 NAXDQ8IW45 347 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 DEFB119Q8N690 84 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 CHST4Q8NCG5 386 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 OTOSQ8NHW6 89 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 PAQR8Q8TEZ7 354 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 ASB5Q8WWX0 329 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 PHYHIPQ92561 330 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 NKX6-2Q9C056 277 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 MBD2Q9UBB5 411 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 RABL2AQ9UBK7 228 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 SLC5A6Q9Y289 635 aa9.32□□□□□ -0.92
CDC42SE1-207ENST00000540998 MPTX1A8MV57 137 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 C17orf105B2RV13 164 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 F5H0A9 414 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 LINC01387J3KSC0 135 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 SLC17A2O00624 439 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 SRPX2O60687 465 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 UTS2O95399 124 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 OPN1LWP04000 364 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 CLPSP04118 112 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZNF735P0CB33 412 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 NTSR1P30989 418 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 CXADRP78310 365 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 INSM1Q01101 510 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZNF117Q03924 483 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 SLC17A1Q14916 467 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 ACKR1Q16570 336 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 PLEKHN1Q494U1 663 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 PDSS1Q5T2R2 415 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 EEF1A1P5Q5VTE0 462 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 WBP2NLQ6ICG8 309 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 CLRN3Q8NCR9 226 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 MRPL48Q96GC5 212 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 MRGPRX1Q96LB2 322 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 FBXO9Q9UK97 447 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 DHDHQ9UQ10 334 aa9.31□□□□□ -0.92
CDC42SE1-207ENST00000540998 ZNF736B4DX44 427 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms