RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 SRSF1Q07955 248 aaKnown RBP eCLIP12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 SPCS2Q15005 226 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 RNPS1Q15287 305 aaKnown RBP12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 KCNMB1Q16558 191 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 C3AR1Q16581 482 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 MEP1BQ16820 701 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 FOXL2NBQ6ZUU3 175 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 AAED1Q7RTV5 226 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 FAM220AQ7Z4H9 259 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 ZFP41Q8N8Y5 198 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 C11orf40Q8WZ69 217 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 DACH2Q96NX9 599 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 COQ7Q99807 217 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 CHCHD6Q9BRQ6 235 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 TTYH2Q9BSA4 534 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 BCO1Q9HAY6 547 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 MRM2Q9UI43 246 aaKnown RBP12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 GNG8Q9UK08 70 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 CAMK2AQ9UQM7 478 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 ZNF175Q9Y473 711 aa12.6□□□□□ -0.39
CYB561A3-216ENST00000540755 LOC100506127A0A0U1RQW1 187 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 A0A1W2PPL8 197 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 E9PI62 339 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 MAGEB4O15481 346 aaPredicted RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 OGG1O15527 345 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 PLPP2O43688 288 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 TMCC2O75069 709 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 ABHD16AO95870 558 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 CRYABP02511 175 aaKnown RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 KRT8P05787 483 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 CD1AP06126 327 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 GALP22466 123 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 RPS27P42677 84 aaKnown RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 TGM4P49221 684 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 RPS25P62851 125 aaKnown RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 ROM1Q03395 351 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 PHYHD1Q5SRE7 291 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 DMKNQ6E0U4 476 aaPredicted RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 RPL22L1Q6P5R6 122 aaKnown RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 CD200R1LQ6Q8B3 271 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 OR10H5Q8NGA6 315 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 FNDC9Q8TBE3 224 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 THEM6Q8WUY1 208 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 SARAFQ96BY9 339 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 OR8B4Q96RC9 309 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 DCUN1D5Q9BTE7 237 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 CENPOQ9BU64 300 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 PRRG4Q9BZD6 226 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 ACOXLQ9NUZ1 547 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 ST6GALNAC2Q9UJ37 374 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 SSR3Q9UNL2 185 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 UGT2A1Q9Y4X1 527 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 SIRT4Q9Y6E7 314 aaPredicted RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 PNMA8CA0A1B0GUJ8 204 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 TRDV1A0A1B0GX56 115 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 DHHO43323 396 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 OR8G3PP0DMU2 310 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 FCGR2AP12318 317 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 ZNF182P17025 639 aaPredicted RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 NTF4P34130 210 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 SIRPAP78324 504 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 KLRB1Q12918 225 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 EIF2B1Q14232 305 aaKnown RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 CDK5R1Q15078 307 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 TRAM1Q15629 374 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 RIPPLY2Q5TAB7 128 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 KCTD18Q6PI47 426 aaPredicted RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 ADGRE4PQ86SQ3 457 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 ZNF679Q8IYX0 411 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 OR52N5Q8NH56 324 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 RPS4Y2Q8TD47 263 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 ABHD6Q9BV23 337 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 ULBP2Q9BZM5 246 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 GP6Q9HCN6 339 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 B3GAT2Q9NPZ5 323 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 POLE4Q9NR33 117 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 PARPBPQ9NWS1 579 aa12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 NOSIPQ9Y314 301 aaKnown RBP12.59□□□□□ -0.39
CYB561A3-216ENST00000540755 PHF3Q92576 2039 aaKnown RBP12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 UNC79Q9P2D8 2635 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 OR14I1A6ND48 311 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 UPK3AO75631 287 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 HLA-DPB1P04440 258 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 FGF9P31371 208 aaPredicted RBP12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF84P51523 738 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 LSM6P62312 80 aaKnown RBP12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 DCTN2Q13561 401 aaKnown RBP12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 PLEKHN1Q494U1 663 aaPredicted RBP12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 OTPQ5XKR4 325 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 MCEMP1Q8IX19 187 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 YIPF7Q8N8F6 280 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 NDNFQ8TB73 568 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 DYNC2LI1Q8TCX1 351 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 ST7LQ8TDW4 575 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 S100ZQ8WXG8 99 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 ZNF775Q96BV0 537 aaPredicted RBP12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 SMIM19Q96E16 107 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 PGLYRP3Q96LB9 341 aa12.58□□□□□ -0.4
CYB561A3-216ENST00000540755 AMELYQ99218 206 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms