RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 CNN2Q99439 309 aaKnown RBP9.23□□□□□ -0.93
VPS33A-204ENST00000540669 MNTQ99583 582 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF416Q9BWM5 594 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 YTHDF1Q9BYJ9 559 aaKnown RBP9.23□□□□□ -0.93
VPS33A-204ENST00000540669 YIPF3Q9GZM5 350 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 OR51V1Q9H2C8 321 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF696Q9H7X3 374 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 WDR76Q9H967 626 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 NOX3Q9HBY0 568 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 DDX28Q9NUL7 540 aaKnown RBP9.23□□□□□ -0.93
VPS33A-204ENST00000540669 CLN6Q9NWW5 311 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 GALNT8Q9NY28 637 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 CRNNQ9UBG3 495 aaPredicted RBP9.23□□□□□ -0.93
VPS33A-204ENST00000540669 ATPIF1Q9UII2 106 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 DIMT1Q9UNQ2 313 aaKnown RBP9.23□□□□□ -0.93
VPS33A-204ENST00000540669 KLHDC2Q9Y2U9 406 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 ICMTO60725 284 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 MPZL1O95297 269 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 ABHD16AO95870 558 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 LIMS3P0CW19 117 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 LIMS4P0CW20 117 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 RNF224P0DH78 156 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 B4GALT1P15291 398 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 ALOX5APP20292 161 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 CD79BP40259 229 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 ENTPD1P49961 510 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF84P51523 738 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 SORDQ00796 357 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 ROM1Q03395 351 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 DOC2BQ14184 412 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 MEP1BQ16820 701 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 KLHL24Q6TFL4 600 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 B3GLCTQ6Y288 498 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 RHOUQ7L0Q8 258 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 SLC16A9Q7RTY1 509 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 CXorf67Q86X51 503 aaPredicted RBP9.22□□□□□ -0.93
VPS33A-204ENST00000540669 EGFL6Q8IUX8 553 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 RFLNBQ8N5W9 214 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 FAM169BQ8N8A8 192 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 WDR31Q8NA23 367 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 OR52I1Q8NGK6 324 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 FGFBP3Q8TAT2 258 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 NSMAFQ92636 917 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 HTRA1Q92743 480 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 GGHQ92820 318 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 FBXO17Q96EF6 278 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 RNFT2Q96EX2 444 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 MAP6Q96JE9 813 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 NR1H4Q96RI1 486 aaPredicted RBP9.22□□□□□ -0.93
VPS33A-204ENST00000540669 INTS14Q96SY0 518 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 AMELYQ99218 206 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 CDCA4Q9BXL8 241 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 SRA1Q9HD15 236 aaKnown RBP9.22□□□□□ -0.93
VPS33A-204ENST00000540669 EMC7Q9NPA0 242 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 OBP2BQ9NPH6 170 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 SLC17A5Q9NRA2 495 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 ELOVL5Q9NYP7 299 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 COPS3Q9UNS2 423 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 MYRFQ9Y2G1 1151 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 RPL36Q9Y3U8 105 aaKnown RBP9.22□□□□□ -0.93
VPS33A-204ENST00000540669 PLCE1Q9P212 2302 aa9.22□□□□□ -0.93
VPS33A-204ENST00000540669 FASNP49327 2511 aaKnown RBP9.21□□□□□ -0.94
VPS33A-204ENST00000540669 OR6C6A6NF89 314 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 EFCAB10A6NFE3 127 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 TVP23AA6NH52 213 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 OR5H1A6NKK0 313 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 SNTNA6NMZ2 147 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 FAM171A2A8MVW0 826 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 MRPS14O60783 128 aaKnown RBP9.21□□□□□ -0.94
VPS33A-204ENST00000540669 ZG16O60844 167 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 SEC14L2O76054 403 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 IGKV3-15P01624 115 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 IGLV1-44P01699 117 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 CDK1P06493 297 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 OR8G3PP0DMU2 310 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 CRYGSP22914 178 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 UGT2B10P36537 528 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 MVKQ03426 396 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 ZNF85Q03923 595 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 AQP6Q13520 282 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 KLHL12Q53G59 568 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 OR7E24Q6IFN5 339 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 KRT80Q6KB66 452 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 ZNF813Q6ZN06 617 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 CFAP77Q6ZQR2 320 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 DPPA2Q7Z7J5 298 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 ZNF584Q8IVC4 421 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 SKA3Q8IX90 412 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 CCDC36Q8IYA8 594 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 OR4F15Q8NGB8 312 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 OR6K6Q8NGW6 343 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 RPS4Y2Q8TD47 263 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 RNF133Q8WVZ7 376 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 FOXN4Q96NZ1 517 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 USB1Q9BQ65 265 aaKnown RBP9.21□□□□□ -0.94
VPS33A-204ENST00000540669 AMBNQ9NP70 447 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 INPP5EQ9NRR6 644 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 UPB1Q9UBR1 384 aa9.21□□□□□ -0.94
VPS33A-204ENST00000540669 LSM2Q9Y333 95 aaKnown RBP9.21□□□□□ -0.94
VPS33A-204ENST00000540669 PCDHGB1Q9Y5G3 927 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms