RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 HINT3Q9NQE9 182 aaKnown RBP11.04□□□□□ -0.64
TSPAN9-207ENST00000539631 ENOPH1Q9UHY7 261 aa11.04□□□□□ -0.64
TSPAN9-207ENST00000539631 ORC6Q9Y5N6 252 aa11.04□□□□□ -0.64
TSPAN9-207ENST00000539631 HRNRQ86YZ3 2850 aaPredicted RBP11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 TVP23AA6NH52 213 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 C12orf71A8MTZ7 269 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 PRR23D1E9PI22 279 aaPredicted RBP11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 ATP6V1G2-DDX39BF2Z307 99 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 M0R129 80 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 PRKYO43930 277 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 HLA-DQA2P01906 255 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 SERPINA5P05154 406 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 PRR23D2P0DMB1 279 aaPredicted RBP11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 PAICSP22234 425 aaKnown RBP11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 RAD23AP54725 363 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 LSM6P62312 80 aaKnown RBP11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 PSG4Q00888 419 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 TEKQ02763 1124 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 GLO1Q04760 184 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 TRIP10Q15642 601 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 PABPC1L2AQ5JQF8 200 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 PLBD1Q6P4A8 553 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 SLC22A25Q6T423 547 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 B3GLCTQ6Y288 498 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 CPOQ8IVL8 374 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 OR2H1Q9GZK4 316 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 WNT5BQ9H1J7 359 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 MRPL22Q9NWU5 206 aaKnown RBP11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 ATP23Q9Y6H3 246 aa11.03□□□□□ -0.64
TSPAN9-207ENST00000539631 IGHV2OR16-5A0A0B4J2B6 119 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 IQCMA0A1B0GVH7 501 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 CRYAAP02489 173 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 APEX1P27695 318 aaKnown RBP11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 PEX2P28328 305 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 CDH11P55287 796 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 PCBD1P61457 104 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 PLP2Q04941 152 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 LRRC36Q1X8D7 754 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 ZNF672Q499Z4 452 aaPredicted RBP11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 LINC01590Q5TEZ4 76 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 CXXC5Q7LFL8 322 aaKnown RBP11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 SYT9Q86SS6 491 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 DEPDC4Q8N2C3 294 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 TCEANCQ8N8B7 351 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 CPEB3Q8NE35 698 aaKnown RBP11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 BBS1Q8NFJ9 593 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 OR10H5Q8NGA6 315 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 MBOAT4Q96T53 435 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 KCNS3Q9BQ31 491 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 WACQ9BTA9 647 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 OR51V1Q9H2C8 321 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 TOR3AQ9H497 397 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 DCLRE1BQ9H816 532 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 ASH2LQ9UBL3 628 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 NKX1-2Q9UD57 310 aaPredicted RBP11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 POU2F3Q9UKI9 436 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 FBXL3Q9UKT7 428 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 POLR1DQ9Y2S0 133 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 TIMM10BQ9Y5J6 103 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 LHFPL6Q9Y693 200 aa11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 ANKHD1Q8IWZ3 2542 aaKnown RBP11.02□□□□□ -0.65
TSPAN9-207ENST00000539631 E7EQL1 145 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 HS3ST1O14792 307 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 GLCEO94923 617 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 SNAP29O95721 258 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 PSKH1P11801 424 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 CCL2P13500 99 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 ZNF35P13682 527 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 ZNF823P16415 610 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 FMO3P31513 532 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 RPS27P42677 84 aaKnown RBP11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 EFNB1P98172 346 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 HGFACQ04756 655 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 SCRN3Q0VDG4 424 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 AQP6Q13520 282 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 KLHL12Q53G59 568 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 CCDC92Q53HC0 331 aaPredicted RBP11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 ZNF774Q6NX45 483 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 CORO6Q6QEF8 472 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 BCDIN3DQ7Z5W3 292 aaKnown RBP11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 LINC00346Q8IVM7 164 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 GALNT4Q8N4A0 578 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 ZNF511Q8NB15 262 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 SLC30A7Q8NEW0 376 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 IL17RDQ8NFM7 739 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 OR6K6Q8NGW6 343 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 TMEM163Q8TC26 289 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 PRRG3Q9BZD7 231 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 GRIP2Q9C0E4 1043 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 WDR76Q9H967 626 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 CISD1Q9NZ45 108 aaKnown RBP11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 COMMD3-BMI1R4GMX3 469 aa11.01□□□□□ -0.65
TSPAN9-207ENST00000539631 E9PQ18 207 aa11□□□□□ -0.65
TSPAN9-207ENST00000539631 H0YHG0 523 aa11□□□□□ -0.65
TSPAN9-207ENST00000539631 CASQ2O14958 399 aaPredicted RBP11□□□□□ -0.65
TSPAN9-207ENST00000539631 RER1O15258 196 aa11□□□□□ -0.65
TSPAN9-207ENST00000539631 SGCEO43556 437 aa11□□□□□ -0.65
TSPAN9-207ENST00000539631 TLX2O43763 284 aaPredicted RBP11□□□□□ -0.65
TSPAN9-207ENST00000539631 DOK2O60496 412 aa11□□□□□ -0.65
TSPAN9-207ENST00000539631 PTHP01270 115 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 249.6 ms