RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 FASP25445 335 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 ATP5A1P25705 553 aaKnown RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 CALCRP30988 508 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 FOXN2P32314 431 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 RPL4P36578 427 aaKnown RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 CSNK1A1P48729 337 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 GLUD2P49448 558 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 PRLHRP49683 370 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 GNG10P50151 68 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 DNA2P51530 1060 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 XKP51811 444 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 CRISP1P54107 249 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 FOXG1P55316 489 aaPredicted RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 CXCR4P61073 352 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 UBE2MP61081 183 aaKnown RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 UBE2KP61086 200 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 RPL27P61353 136 aaKnown RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 MRPS22P82650 360 aaKnown RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 SCRN3Q0VDG4 424 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 BNIP2Q12982 314 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 SRSF9Q13242 221 aaKnown RBP eCLIP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 PDK2Q15119 407 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 PSG5Q15238 335 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 UPP1Q16831 310 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 COX19Q49B96 90 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 GTDC1Q4AE62 458 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 AKIRIN2Q53H80 203 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 SOHLH1Q5JUK2 328 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 PPM1LQ5SGD2 360 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 CEP85LQ5SZL2 805 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 PXDC1Q5TGL8 231 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 CTRB2Q6GPI1 263 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 SLC18B1Q6NT16 456 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 ARMCX5Q6P1M9 558 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 FAHD2BQ6P2I3 314 aaPredicted RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 FAHD1Q6P587 224 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 SLC25A47Q6Q0C1 308 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 RAD9BQ6WBX8 426 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 C3P1Q6ZMU1 363 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF730Q6ZMV8 503 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 CYS1Q717R9 158 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 SSX7Q7RTT5 188 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 SSX6Q7RTT6 188 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 PIM3Q86V86 326 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 TMEM25Q86YD3 366 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 TPRX1Q8N7U7 411 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 ZSCAN4Q8NAM6 433 aaPredicted RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 OR5T2Q8NGG2 359 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 OR6K2Q8NGY2 324 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 OR4Q3Q8NH05 313 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 ACER1Q8TDN7 264 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 RORBQ92753 470 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 ABTB1Q969K4 478 aaPredicted RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 SLC35B4Q969S0 331 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 TMEM143Q96AN5 459 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 FAHD2AQ96GK7 314 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 ITCHQ96J02 903 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 MCCC1Q96RQ3 725 aaPredicted RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 UTP23Q9BRU9 249 aaKnown RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 CCDC28BQ9BUN5 200 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 MMP28Q9H239 520 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 FNDC4Q9H6D8 234 aaPredicted RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 PATZ1Q9HBE1 687 aaKnown RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 SDR39U1Q9NRG7 319 aaPredicted RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 SAMSN1Q9NSI8 373 aaKnown RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 PLEKHJ1Q9NW61 149 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 ELF5Q9UKW6 265 aaPredicted RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 AGO1Q9UL18 857 aaKnown RBP3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 ICAM5Q9UMF0 924 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 SLC22A13Q9Y226 551 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 PDE10AQ9Y233 779 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 OARD1Q9Y530 152 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 PTPRSQ13332 1948 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 RTL9Q8NET4 1388 aa3.24□□□□□ -1.89
AC055720.1-201ENST00000539552 ZNF469Q96JG9 3925 aaPredicted RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 MED13LQ71F56 2210 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 A0A087WZ39 114 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 A0A0A6YYD4 124 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 LOC101059948A0A1B0GTJ6 334 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 ARGFXA6NJG6 315 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 TMEM114B3SHH9 223 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 ANHXE9PGG2 379 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 DCTN6O00399 190 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 GOSR2O14653 212 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 ADAM10O14672 748 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 TNFSF11O14788 317 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 PPIHO43447 177 aaKnown RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 TACC2O95359 2948 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 PSMG1O95456 288 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 NTN1O95631 604 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 CD160O95971 181 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 IFNA14P01570 189 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 PRSS2P07478 247 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 IGHV4-30-4P0DP06 118 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 HSPD1P10809 573 aaKnown RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 MYOD1P15172 320 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 MYOGP15173 224 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 CXCR2P25025 360 aa3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 YAP1P46937 504 aaKnown RBP3.23□□□□□ -1.89
AC055720.1-201ENST00000539552 KPNA2P52292 529 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms