RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 PRRC2AP48634 2157 aaKnown RBP13.61□□□□□ -0.23
RPAIN-206ENST00000539417 FAM183AA6NL82 134 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 PAX7P23759 505 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 EPHA2P29317 976 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 CDK5Q00535 292 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 ADIPOQQ15848 244 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 C11orf71Q6IPW1 123 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 DTX2Q86UW9 622 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 DEPDC4Q8N2C3 294 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 ICA1LQ8NDH6 482 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 SLC30A7Q8NEW0 376 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 SLC26A10Q8NG04 563 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 CENPNQ96H22 339 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-206ENST00000539417 KCNS3Q9BQ31 491 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 BDH2Q9BUT1 245 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 NMNAT2Q9BZQ4 307 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 GABARAPL1Q9H0R8 117 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 OR51B6Q9H340 312 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 ZNF556Q9HAH1 456 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 CA10Q9NS85 328 aa13.61□□□□□ -0.23
RPAIN-206ENST00000539417 MRPL22Q9NWU5 206 aaKnown RBP13.61□□□□□ -0.23
RPAIN-206ENST00000539417 TMEFF2Q9UIK5 374 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-206ENST00000539417 TVP23AA6NH52 213 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 OVOL3O00110 214 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 NDUFS7O75251 213 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 FCGR1AP12314 374 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 NR4A1P22736 598 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 CRABP1P29762 137 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 GRK5P34947 590 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 RPS27P42677 84 aaKnown RBP13.6□□□□□ -0.23
RPAIN-206ENST00000539417 ARHGDIAP52565 204 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 SNTB2Q13425 540 aaKnown RBP13.6□□□□□ -0.23
RPAIN-206ENST00000539417 KCNMB1Q16558 191 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 CORO6Q6QEF8 472 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 HIPK1Q86Z02 1210 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 SLC7A6Q92536 515 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 PERPQ96FX8 193 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 RAB3IPQ96QF0 476 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-206ENST00000539417 RACGAP1Q9H0H5 632 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 CXXC4Q9H2H0 198 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 MOV10Q9HCE1 1003 aaKnown RBP13.6□□□□□ -0.23
RPAIN-206ENST00000539417 S100A14Q9HCY8 104 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 PAPOLBQ9NRJ5 636 aaKnown RBP13.6□□□□□ -0.23
RPAIN-206ENST00000539417 CMC2Q9NRP2 79 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 KIF17Q9P2E2 1029 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 ASH2LQ9UBL3 628 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 FKBP7Q9Y680 259 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 LHFPL6Q9Y693 200 aa13.6□□□□□ -0.23
RPAIN-206ENST00000539417 CREBBPQ92793 2442 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 FAM157BP0CG42 384 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 POLR2IP36954 125 aaKnown RBP13.59□□□□□ -0.23
RPAIN-206ENST00000539417 CRISP1P54107 249 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 ERVS71-1P61550 626 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 HSF2Q03933 536 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 DAG1Q14118 895 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 CCDC92Q53HC0 331 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-206ENST00000539417 KDM4DQ6B0I6 523 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 SLC27A4Q6P1M0 643 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 DPPA2Q7Z7J5 298 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 LINC00346Q8IVM7 164 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 MUC15Q8N387 334 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 NUP37Q8NFH4 326 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 TMEM171Q8WVE6 324 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 PTP4A1Q93096 173 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 PIGTQ969N2 578 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 POM121L2Q96KW2 1035 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 FOXC2Q99958 501 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 KCNN2Q9H2S1 579 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 BEX4Q9NWD9 120 aaPredicted RBP13.59□□□□□ -0.23
RPAIN-206ENST00000539417 FZR1Q9UM11 496 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 BAIAP2Q9UQB8 552 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 RRP15Q9Y3B9 282 aaKnown RBP13.59□□□□□ -0.23
RPAIN-206ENST00000539417 TIMM10BQ9Y5J6 103 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 USF3Q68DE3 2245 aa13.59□□□□□ -0.23
RPAIN-206ENST00000539417 TMEM129A0AVI4 362 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 C12orf71A8MTZ7 269 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 M0R129 80 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 RER1O15258 196 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 SURF4O15260 269 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 OR4A8P0C604 315 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 SPI1P17947 270 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 STOMP27105 288 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 APOBEC3AP31941 199 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-206ENST00000539417 WNT5AP41221 380 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 GUCA1AP43080 201 aaPredicted RBP13.58□□□□□ -0.24
RPAIN-206ENST00000539417 PTH2RP49190 550 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 LSM6P62312 80 aaKnown RBP13.58□□□□□ -0.24
RPAIN-206ENST00000539417 TEKQ02763 1124 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 LINC01590Q5TEZ4 76 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 ZNF544Q6NX49 715 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 DNM1P34Q6PK57 102 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 LRP11Q86VZ4 500 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 ZDHHC13Q8IUH4 622 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 ZNF511Q8NB15 262 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 IL17RDQ8NFM7 739 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 OR4F15Q8NGB8 312 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 CIB1Q99828 191 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 SLC25A19Q9HC21 320 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 KRT84Q9NSB2 600 aa13.58□□□□□ -0.24
RPAIN-206ENST00000539417 ZNF701Q9NV72 531 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms