RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 OR2M5A3KFT3 312 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 H0YC42 278 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 H3BMH7 237 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 SIGLEC6O43699 453 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 SLC25A12O75746 678 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 PDGFAP04085 211 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 GIMD1P0DJR0 217 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 GP1BBP13224 206 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 NAGAP17050 411 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 ROM1Q03395 351 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 SSBP1Q04837 148 aaKnown RBP13.08□□□□□ -0.32
CDCA3-207ENST00000538862 EBPQ15125 230 aaKnown RBP13.08□□□□□ -0.32
CDCA3-207ENST00000538862 POU4F3Q15319 338 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 TOMM20Q15388 145 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 TOMM34Q15785 309 aaPredicted RBP13.08□□□□□ -0.32
CDCA3-207ENST00000538862 MEP1BQ16820 701 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 PCGF3Q3KNV8 242 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 HLA-DQA1Q5Y7H0 255 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 SLC18B1Q6NT16 456 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 FAAP20Q6NZ36 180 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 HDDC2Q7Z4H3 204 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 MARCH3Q86UD3 253 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 OR51D1Q8NGF3 324 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 RNF128Q8TEB7 428 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 TSEN15Q8WW01 171 aaKnown RBP13.08□□□□□ -0.32
CDCA3-207ENST00000538862 GAL3ST4Q96RP7 486 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 AMELYQ99218 206 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 NUDT9Q9BW91 350 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 CHIAQ9BZP6 476 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 VSX1Q9NZR4 365 aaPredicted RBP13.08□□□□□ -0.32
CDCA3-207ENST00000538862 KLK13Q9UKR3 277 aa13.08□□□□□ -0.32
CDCA3-207ENST00000538862 TCRBV16S1A1N1A0A5B0 115 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 C11orf98E9PRG8 122 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 SLC17A2O00624 439 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 TSPAN9O75954 239 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 DXOO77932 396 aaKnown RBP13.07□□□□□ -0.32
CDCA3-207ENST00000538862 CSF2RBP32927 897 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 RPS27P42677 84 aaKnown RBP13.07□□□□□ -0.32
CDCA3-207ENST00000538862 OR1D4P47884 311 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 CLDN6P56747 220 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 HNRNPKP61978 463 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDCA3-207ENST00000538862 OPCMLQ14982 345 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 C1QL3Q5VWW1 255 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 SLC36A1Q7Z2H8 476 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 ZNF519Q8TB69 540 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 DAZLQ92904 295 aaKnown RBP13.07□□□□□ -0.32
CDCA3-207ENST00000538862 PTDSS2Q9BVG9 487 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 TBL1XR1Q9BZK7 514 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 GSX2Q9BZM3 304 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 ULBP3Q9BZM4 244 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 TXNIPQ9H3M7 391 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 CA10Q9NS85 328 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 LOC100289279A0A1B0GTE1 492 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 UBE2QL1A1L167 161 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 PYCARD-AS1I3L0S3 204 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 NPIPB7O75200 414 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 GPANK1O95872 356 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 HLA-DQA2P01906 255 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 POU3F4P49335 361 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 POLR2HP52434 150 aaKnown RBP13.07□□□□□ -0.32
CDCA3-207ENST00000538862 PNLIPRP2P54317 469 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 DLX5P56178 289 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 PLA2G7Q13093 441 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 ACKR1Q16570 336 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 DEFB133Q30KQ1 61 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 FAM166AQ6J272 317 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 KCTD18Q6PI47 426 aaPredicted RBP13.07□□□□□ -0.32
CDCA3-207ENST00000538862 OGFOD3Q6PK18 319 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 LRRC69Q6ZNQ3 347 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 C9orf40Q8IXQ3 194 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 OR8K3Q8NH51 312 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 FAM3DQ96BQ1 224 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 CNTNAP3BQ96NU0 1288 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 CNTNAP3Q9BZ76 1288 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 EPG5Q9HCE0 2579 aa13.07□□□□□ -0.32
CDCA3-207ENST00000538862 IGLV1-36A0A0B4J1U3 117 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 CIB4A0PJX0 185 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 OR6A2O95222 327 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 NUDT14O95848 222 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 CFDP00746 253 aaPredicted RBP13.06□□□□□ -0.32
CDCA3-207ENST00000538862 IGHMP01871 453 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 AKAIN1P0CW23 69 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 NFYAP23511 347 aaPredicted RBP13.06□□□□□ -0.32
CDCA3-207ENST00000538862 CCKBRP32239 447 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 NR0B1P51843 470 aaKnown RBP13.06□□□□□ -0.32
CDCA3-207ENST00000538862 RP1P56715 2156 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 PLCXD2Q0VAA5 305 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 RAB11BQ15907 218 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 ODF4Q2M2E3 257 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 C2orf76Q3KRA6 126 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 FAM198BQ6UWH4 519 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 C5orf46Q6UWT4 87 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 DHRS13Q6UX07 377 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 CARFQ8N187 725 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 OR4C16Q8NGL9 310 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 OR6N1Q8NGY5 312 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.06□□□□□ -0.32
CDCA3-207ENST00000538862 SLC25A36Q96CQ1 311 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 GINS4Q9BRT9 223 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 WWTR1Q9GZV5 400 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms