RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 NLRC3Q7RTR2 1065 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 ZNF454Q8N9F8 522 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 OR4D10Q8NGI6 311 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 DDIT4LQ96D03 193 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 CKLFQ9UBR5 152 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 IGHV5-10-1A0A0J9YXX1 117 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 H7C417 338 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 EIF1AYO14602 144 aaKnown RBP22.29■■□□□ 1.16
RAB40C-204ENST00000538492 CD2P06729 351 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 EPHA8P29322 1005 aaPredicted RBP22.29■■□□□ 1.16
RAB40C-204ENST00000538492 SSTR2P30874 369 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 DAP3P51398 398 aaKnown RBP22.29■■□□□ 1.16
RAB40C-204ENST00000538492 INPP5JQ15735 1006 aaPredicted RBP22.29■■□□□ 1.16
RAB40C-204ENST00000538492 ZNF782Q6ZMW2 699 aaPredicted RBP22.29■■□□□ 1.16
RAB40C-204ENST00000538492 OR51A2Q8NGJ7 313 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 SLC25A44Q96H78 314 aaPredicted RBP22.29■■□□□ 1.16
RAB40C-204ENST00000538492 KCNK17Q96T54 332 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 IRF2BPLQ9H1B7 796 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 CHST11Q9NPF2 352 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 MTFP1Q9UDX5 166 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 CGGBP1Q9UFW8 167 aaPredicted RBP22.29■■□□□ 1.16
RAB40C-204ENST00000538492 SCP2D1Q9UJQ7 156 aa22.29■■□□□ 1.16
RAB40C-204ENST00000538492 LY6G6EA0A0G2JKS1 128 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 LOC100289279A0A1B0GTE1 492 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 TMEM272A0A1B0GTI8 110 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 VSTM2BA6NLU5 285 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 EFNA2O43921 213 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 ICMTO60725 284 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 GLDNQ6ZMI3 551 aaPredicted RBP22.28■■□□□ 1.16
RAB40C-204ENST00000538492 ATG5Q9H1Y0 275 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 TMEM185BQ9H7F4 350 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 EMC3Q9P0I2 261 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 PPP4R1LQ9P1A2 415 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 EIF3KQ9UBQ5 218 aaKnown RBP22.28■■□□□ 1.16
RAB40C-204ENST00000538492 R4GMQ9 66 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 U3KQA8 63 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 CIB4A0PJX0 185 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 DCDC2BA2VCK2 349 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 SIGLEC6O43699 453 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 PTGS2P35354 604 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 PER3P56645 1201 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 ZP4Q12836 540 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 NR0B2Q15466 257 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 GLYATL3Q5SZD4 288 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 OR10G3Q8NGC4 313 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 OR4C16Q8NGL9 310 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 OR13C3Q8NGS6 347 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 ST7LQ8TDW4 575 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 AKIRIN1Q9H9L7 192 aaPredicted RBP22.28■■□□□ 1.16
RAB40C-204ENST00000538492 CENPMQ9NSP4 180 aa22.28■■□□□ 1.16
RAB40C-204ENST00000538492 MYEF2Q9P2K5 600 aaKnown RBP22.28■■□□□ 1.16
RAB40C-204ENST00000538492 LOC101059948A0A1B0GTJ6 334 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 SRSF10O75494 262 aaKnown RBP22.27■■□□□ 1.16
RAB40C-204ENST00000538492 OR2J2O76002 312 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 NDUFB6O95139 128 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 MAP2K6P52564 334 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 MFSD13AQ14CX5 517 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 LGALSLQ3ZCW2 172 aaPredicted RBP22.27■■□□□ 1.16
RAB40C-204ENST00000538492 CDH24Q86UP0 819 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 BPHLQ86WA6 291 aaPredicted RBP22.27■■□□□ 1.16
RAB40C-204ENST00000538492 OR5M1Q8NGP8 315 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 MED12Q93074 2177 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 LMX1BO60663 402 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 FOSL2P15408 326 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 EIF1AXP47813 144 aaKnown RBP22.27■■□□□ 1.16
RAB40C-204ENST00000538492 ZBTB37Q5TC79 503 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 LYSMD4Q5XG99 296 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 DNM1P34Q6PK57 102 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 CPEB2Q7Z5Q1 589 aaKnown RBP22.27■■□□□ 1.16
RAB40C-204ENST00000538492 CCDC74BQ96LY2 380 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 CRB3Q9BUF7 120 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 CDCP1Q9H5V8 836 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 PTTG3PQ9NZH4 202 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 SIT1Q9Y3P8 196 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 NPTNQ9Y639 398 aa22.27■■□□□ 1.16
RAB40C-204ENST00000538492 TMEM269A0A1B0GVZ9 245 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 LOC107986453A0A1B0GWG9 222 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 CFPP27918 469 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 ZNF81P51508 661 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 ZNF41P51814 821 aaPredicted RBP22.26■■□□□ 1.15
RAB40C-204ENST00000538492 BIDP55957 195 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 SPOCK1Q08629 439 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 THOC7Q6I9Y2 204 aaKnown RBP22.26■■□□□ 1.15
RAB40C-204ENST00000538492 FAM166AQ6J272 317 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 SEZ6L2Q6UXD5 910 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 MEIOBQ8N635 442 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 G6PC2Q9NQR9 355 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 NPDC1Q9NQX5 325 aaPredicted RBP22.26■■□□□ 1.15
RAB40C-204ENST00000538492 CA10Q9NS85 328 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 MGAT4CQ9UBM8 478 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 OR52A1Q9UKL2 312 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 A0A1W2PPC1 479 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 LIPT2A6NK58 231 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 G3V3Q6 166 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 PYCARD-AS1I3L0S3 204 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 SUMO3P55854 103 aaPredicted RBP22.26■■□□□ 1.15
RAB40C-204ENST00000538492 FOXK1P85037 733 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 GLT8D1Q68CQ7 371 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 TEX261Q6UWH6 196 aa22.26■■□□□ 1.15
RAB40C-204ENST00000538492 OR52B4Q8NGK2 314 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms