RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 DOK3Q7L591 496 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 CISD2Q8N5K1 135 aaKnown RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 SLC15A4Q8N697 577 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 AMER3Q8N944 861 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 GDPD1Q8N9F7 314 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 OR1J1Q8NGS3 322 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 SMAP2Q8WU79 429 aaPredicted RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 ZMAT3Q9HA38 289 aaKnown RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 MLXQ9UH92 298 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 PPIL1Q9Y3C6 166 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 KCNE3Q9Y6H6 103 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 TDRD15B5MCY1 1934 aaKnown RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 OR2A25A4D2G3 310 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ANKRD61A6NGH8 418 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 M0R135 149 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 LAP3P28838 519 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ZNF136P52737 540 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 PMPCAQ10713 525 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 CAMK2BQ13554 666 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 AGERQ15109 404 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 MSMO1Q15800 293 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 HACD4Q5VWC8 232 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 RNLSQ5VYX0 342 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 CCBE1Q6UXH8 406 aaPredicted RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 LIMS2Q7Z4I7 341 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ANGPTL5Q86XS5 388 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ZNF679Q8IYX0 411 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 KCNG3Q8TAE7 436 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 SGK3Q96BR1 496 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ZNF799Q96GE5 643 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 TNFRSF19Q9NS68 423 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ONECUT1Q9UBC0 465 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 UBQLN2Q9UHD9 624 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ABCD4O14678 606 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 MOSPD3O75425 235 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 CNR1P21554 472 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 MNX1P50219 401 aaPredicted RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 KCNJ8Q15842 424 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ABI3BPQ7Z7G0 1075 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 LRRC56Q8IYG6 542 aaPredicted RBP4.87□□□□□ -1.63
LRP6-203ENST00000538239 TMEM99Q8N816 258 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 ADAMTS14Q8WXS8 1223 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 TTC9Q92623 222 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 LRRC3BQ96PB8 259 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 TSSK2Q96PF2 358 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 S1PR5Q9H228 398 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 UBTD1Q9HAC8 227 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 PRDM7Q9NQW5 492 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 TCFL5Q9UL49 500 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 NUBP2Q9Y5Y2 271 aa4.87□□□□□ -1.63
LRP6-203ENST00000538239 NUP205Q92621 2012 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 SH2D1BO14796 132 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 RGS11O94810 467 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 SOD1P00441 154 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 SP9P0CG40 484 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 RPS27P42677 84 aaKnown RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 RAB4BP61018 213 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 TMEM211Q6ICI0 200 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 MDGA2Q7Z553 956 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 CXorf67Q86X51 503 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 RBMXL3Q8N7X1 1067 aaKnown RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 OR51F2Q8NH61 342 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 FAM60AQ9NP50 221 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 SLC25A37Q9NYZ2 338 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 SPINT1O43278 529 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 GPRIN2O60269 458 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 TFP02787 698 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 DIO1P49895 249 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 EIF2S3LQ2VIR3 472 aaKnown RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 CEACAM16Q2WEN9 425 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 ZNF628Q5EBL2 1059 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 METAP1DQ6UB28 335 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 ZNF793Q6ZN11 406 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 GDPGP1Q6ZNW5 385 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 BORCS7Q96B45 105 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 UBL7Q96S82 380 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 ABHD6Q9BV23 337 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 PPA2Q9H2U2 334 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 GON4LQ3T8J9 2241 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 A0A1B0GTL3 188 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 PRSS37A4D1T9 235 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 IL7P13232 177 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 S100PP25815 95 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 GIFP27352 417 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 SNRPD2P62316 118 aaKnown RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 FZD5Q13467 585 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 YIF1BQ5BJH7 314 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 DMRTC1Q5HYR2 192 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 PMS2CLQ68D20 193 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 C19orf48Q6RUI8 117 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 C1orf87Q8N0U7 546 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 CLDN22Q8N7P3 220 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 TMEM102Q8N9M5 508 aaPredicted RBP4.86□□□□□ -1.63
LRP6-203ENST00000538239 NOXO1Q8NFA2 376 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 HAS2Q92819 552 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 COX14Q96I36 57 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 PDCD1LG2Q9BQ51 273 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 CLEC2DQ9UHP7 191 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 KIF25Q9UIL4 384 aa4.86□□□□□ -1.63
LRP6-203ENST00000538239 HDGFL3Q9Y3E1 203 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms