RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 RAB5BP61020 215 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 RASGEF1BQ0VAM2 473 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ELAVL3Q14576 367 aaKnown RBP7.04□□□□□ -1.28
CPSF7-216ENST00000536548 MEF2DQ14814 521 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 GRM7Q14831 915 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 RAB11BQ15907 218 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 C2orf68Q2NKX9 166 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 HNRNPA1L2Q32P51 320 aaKnown RBP7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ALG10BQ5I7T1 473 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF684Q5T5D7 378 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 AVPI1Q5T686 147 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 DCAF12L2Q5VW00 463 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ELP2Q6IA86 826 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 RAB12Q6IQ22 244 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF425Q6IV72 752 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 JMJD6Q6NYC1 403 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-216ENST00000536548 FAAP20Q6NZ36 180 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 C3orf33Q6P1S2 294 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ULK3Q6PHR2 472 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 IL34Q6ZMJ4 242 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 JAZF1Q86VZ6 243 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 GABRG1Q8N1C3 465 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ARL14Q8N4G2 192 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 RFLNBQ8N5W9 214 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 INO80EQ8NBZ0 244 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-216ENST00000536548 C7orf57Q8NEG2 295 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 OR2L3Q8NG85 312 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 OR4D10Q8NGI6 311 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 OR51S1Q8NGJ8 323 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 GRHL3Q8TE85 626 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 DUSP19Q8WTR2 217 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 RGP1Q92546 391 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-216ENST00000536548 CCDC74AQ96AQ1 378 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ADAD1Q96M93 576 aaKnown RBP7.04□□□□□ -1.28
CPSF7-216ENST00000536548 DMRTA2Q96SC8 542 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 INSM2Q96T92 566 aaPredicted RBP7.04□□□□□ -1.28
CPSF7-216ENST00000536548 HDAC8Q9BY41 377 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 NMNAT2Q9BZQ4 307 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 POFUT1Q9H488 388 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ADAP2Q9NPF8 381 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ASF1BQ9NVP2 202 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 USP36Q9P275 1121 aaKnown RBP7.04□□□□□ -1.28
CPSF7-216ENST00000536548 CTSFQ9UBX1 484 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 FBXL4Q9UKA2 621 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 SSUH2Q9Y2M2 353 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 SLC27A6Q9Y2P4 619 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF337Q9Y3M9 751 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 TMEM14AQ9Y6G1 99 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 PDZD2O15018 2839 aa7.04□□□□□ -1.28
CPSF7-216ENST00000536548 TRAV18A0A075B6X5 111 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 LOC100289279A0A1B0GTE1 492 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 TMEM272A0A1B0GTI8 110 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 A0A1W2PS29 197 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 RNF222A6NCQ9 220 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 SYNDIG1LA6NDD5 238 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 LRRC72A6NJI9 287 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 MCIDASD6RGH6 385 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 EIF1AYO14602 144 aaKnown RBP7.03□□□□□ -1.28
CPSF7-216ENST00000536548 MAGEB4O15481 346 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-216ENST00000536548 FGF16O43320 207 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 WNT11O96014 354 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 ADH1CP00326 375 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 HEXAP06865 529 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 CISD3P0C7P0 127 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 FAM87AP0C7U9 286 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF888P0CJ79 500 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-216ENST00000536548 SMIM6P0DI80 62 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 ADH5P11766 374 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 APEHP13798 732 aaKnown RBP7.03□□□□□ -1.28
CPSF7-216ENST00000536548 ACHEP22303 614 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 MAP3K8P41279 467 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 EIF1AXP47813 144 aaKnown RBP7.03□□□□□ -1.28
CPSF7-216ENST00000536548 AFF3P51826 1226 aaKnown RBP7.03□□□□□ -1.28
CPSF7-216ENST00000536548 GPR85P60893 370 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 EIF5AP63241 154 aaKnown RBP7.03□□□□□ -1.28
CPSF7-216ENST00000536548 UBE2IP63279 158 aaKnown RBP7.03□□□□□ -1.28
CPSF7-216ENST00000536548 INSM1Q01101 510 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-216ENST00000536548 NAAAQ02083 359 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 OC90Q02509 493 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-216ENST00000536548 EGR3Q06889 387 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 FGL2Q14314 439 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF234Q14588 700 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 RPE65Q16518 533 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 SWI5Q1ZZU3 235 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 C10orf91Q5T1B1 145 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 FHL5Q5TD97 284 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 PRAMEF17Q5VTA0 474 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 LINC00114Q6XXX2 140 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF813Q6ZN06 617 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 LDLRAD3Q86YD5 345 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF440Q8IYI8 595 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 GTPBP8Q8N3Z3 284 aaPredicted RBP7.03□□□□□ -1.28
CPSF7-216ENST00000536548 ZNF676Q8N7Q3 588 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 CLEC1AQ8NC01 280 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 NPEPL1Q8NDH3 523 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 CADM4Q8NFZ8 388 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 OR52E1Q8NGJ3 308 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 OR6K6Q8NGW6 343 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 STOML3Q8TAV4 291 aa7.03□□□□□ -1.28
CPSF7-216ENST00000536548 STK35Q8TDR2 534 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms