RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 GGTLC2Q14390 218 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 TMEM249Q2WGJ8 235 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 TMEM255AQ5JRV8 349 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 SPATA46Q5T0L3 261 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 LCN8Q6JVE9 175 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 C1orf94Q6P1W5 598 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 TRPM8Q7Z2W7 1104 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 ARHGAP24Q8N264 748 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 OR1J1Q8NGS3 322 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 GNPDA2Q8TDQ7 276 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 NEU4Q8WWR8 484 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-206ENST00000536398 GTF3AQ92664 365 aaKnown RBP12.23□□□□□ -0.45
UBE3B-206ENST00000536398 CCDC124Q96CT7 223 aaKnown RBP12.23□□□□□ -0.45
UBE3B-206ENST00000536398 ERMAPQ96PL5 475 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-206ENST00000536398 BTBD10Q9BSF8 475 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 THTPAQ9BU02 230 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 NDEL1Q9GZM8 345 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 LRMDAQ9H2I8 198 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 OR52D1Q9H346 318 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 YAE1D1Q9NRH1 226 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 VSX1Q9NZR4 365 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-206ENST00000536398 TAAR3PQ9P1P4 343 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 TIMM10BQ9Y5J6 103 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 SVEP1Q4LDE5 3571 aa12.23□□□□□ -0.45
UBE3B-206ENST00000536398 HIVEP2P31629 2446 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 IGHV4-61A0A0C4DH41 118 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 LOC390937A0A1W2PQ73 354 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 TNFRSF11BO00300 401 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 DCTN6O00399 190 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 ACOT8O14734 319 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 AHCYL1O43865 530 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 CD5LO43866 347 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 KHDRBS3O75525 346 aaKnown RBP12.22□□□□□ -0.45
UBE3B-206ENST00000536398 NGFP01138 241 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 HPXP02790 462 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 ZNF250P15622 560 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 HIST1H1CP16403 213 aaKnown RBP12.22□□□□□ -0.45
UBE3B-206ENST00000536398 USF1P22415 310 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-206ENST00000536398 RAD52P43351 418 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 MAGEA2P43356 314 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 GDI2P50395 445 aaKnown RBP12.22□□□□□ -0.45
UBE3B-206ENST00000536398 RPS6KA3P51812 740 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 ELFN2Q5R3F8 820 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 ZNF770Q6IQ21 691 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-206ENST00000536398 OR4K13Q8NH42 304 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 SYNPRQ8TBG9 265 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 UBASH3BQ8TF42 649 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 C11orf40Q8WZ69 217 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 NMNAT3Q96T66 252 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 IFT27Q9BW83 186 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 BPESC1Q9GZL8 116 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 EGLN3Q9H6Z9 239 aa12.22□□□□□ -0.45
UBE3B-206ENST00000536398 SRA1Q9HD15 236 aaKnown RBP12.22□□□□□ -0.45
UBE3B-206ENST00000536398 PRPF19Q9UMS4 504 aaKnown RBP12.22□□□□□ -0.45
UBE3B-206ENST00000536398 NAV3Q8IVL0 2385 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 C12orf71A8MTZ7 269 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 KRT36O76013 467 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 GASTP01350 101 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 TP53P04637 393 aaPredicted RBP12.21□□□□□ -0.45
UBE3B-206ENST00000536398 COL8A2P25067 703 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 SLC6A6P31641 620 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 MPV17P39210 176 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 PCBD1P61457 104 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 PPP2R2BQ00005 443 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 GLO1Q04760 184 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 TSPAN31Q12999 210 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 MEP1BQ16820 701 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 MTX3Q5HYI7 312 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 CLEC12AQ5QGZ9 265 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 SLC35F1Q5T1Q4 408 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 LEG1Q6P5S2 330 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 ZNF620Q6ZNG0 422 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 RFPL4BQ6ZWI9 263 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.21□□□□□ -0.45
UBE3B-206ENST00000536398 SYT9Q86SS6 491 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 PRIMA1Q86XR5 153 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 GLB1L2Q8IW92 636 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 OR6V1Q8N148 313 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 ZNF786Q8N393 782 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 SLC25A40Q8TBP6 338 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 SLC7A6Q92536 515 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 PIMREGQ9BSJ6 248 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 BCL2L14Q9BZR8 327 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 C1orf21Q9H246 121 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 FN3KQ9H479 309 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 MAGIXQ9H6Y5 334 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 FBXO9Q9UK97 447 aaPredicted RBP12.21□□□□□ -0.45
UBE3B-206ENST00000536398 U3KQV3 271 aa12.21□□□□□ -0.45
UBE3B-206ENST00000536398 CUBNO60494 3623 aa12.2□□□□□ -0.46
UBE3B-206ENST00000536398 IGLV3-9A0A075B6K5 115 aa12.2□□□□□ -0.46
UBE3B-206ENST00000536398 IGLV1-36A0A0B4J1U3 117 aa12.2□□□□□ -0.46
UBE3B-206ENST00000536398 LRP5LA4QPB2 252 aa12.2□□□□□ -0.46
UBE3B-206ENST00000536398 NDUFS8O00217 210 aa12.2□□□□□ -0.46
UBE3B-206ENST00000536398 NCR1O76036 304 aa12.2□□□□□ -0.46
UBE3B-206ENST00000536398 CCNB2O95067 398 aa12.2□□□□□ -0.46
UBE3B-206ENST00000536398 ERCC1P07992 297 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-206ENST00000536398 IGHV4-31P0DP07 118 aa12.2□□□□□ -0.46
UBE3B-206ENST00000536398 APEHP13798 732 aaKnown RBP12.2□□□□□ -0.46
UBE3B-206ENST00000536398 IFNGR2P38484 337 aa12.2□□□□□ -0.46
UBE3B-206ENST00000536398 MAGEB1P43366 347 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms