RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 PCDHAC1Q9H158 963 aa10.96□□□□□ -0.65
TNFRSF1A-207ENST00000535958 PATZ1Q9HBE1 687 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-207ENST00000535958 NPHS2Q9NP85 383 aa10.96□□□□□ -0.65
TNFRSF1A-207ENST00000535958 MEPEQ9NQ76 525 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-207ENST00000535958 ZNF69Q9UC07 566 aa10.96□□□□□ -0.65
TNFRSF1A-207ENST00000535958 EGFL7Q9UHF1 273 aa10.96□□□□□ -0.65
TNFRSF1A-207ENST00000535958 BAG5Q9UL15 447 aa10.96□□□□□ -0.65
TNFRSF1A-207ENST00000535958 RAB21Q9UL25 225 aa10.96□□□□□ -0.65
TNFRSF1A-207ENST00000535958 SH3GLB1Q9Y371 365 aa10.96□□□□□ -0.65
TNFRSF1A-207ENST00000535958 MED31Q9Y3C7 131 aa10.96□□□□□ -0.65
TNFRSF1A-207ENST00000535958 TIMM10BQ9Y5J6 103 aa10.96□□□□□ -0.65
TNFRSF1A-207ENST00000535958 LOC100509620A0A075B734 347 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 NPIPB13A6NJU9 1138 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 POM121CA8CG34 1229 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 NPIPB4C9JG80 1138 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 LYPD3O95274 346 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 RNASE1P07998 156 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 CST2P09228 141 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ZFP36P26651 326 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 LAP3P28838 519 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ZNF133P52736 654 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 FAM27BQ5VT28 67 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 DLEU7Q6UYE1 221 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 OR52E2Q8NGJ4 325 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TMEM255BQ8WV15 326 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TMEM239Q8WW34 195 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 HDAC2Q92769 488 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 NABP1Q96AH0 204 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TAMM41Q96BW9 452 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 LRRC58Q96CX6 371 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 C4orf45Q96LM5 186 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ALG12Q9BV10 488 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 C1QTNF5Q9BXJ0 243 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 POLR2J2Q9GZM3 115 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 POLR2J3Q9H1A7 115 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TXNIPQ9H3M7 391 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 MMP26Q9NRE1 261 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 MAN2C1Q9NTJ4 1040 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 PPP1R3CQ9UQK1 317 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 UGT2A1Q9Y4X1 527 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 INSIG2Q9Y5U4 225 aa10.95□□□□□ -0.66
TNFRSF1A-207ENST00000535958 C12orf71A8MTZ7 269 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ERLIN1O75477 346 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 OR5F1O95221 314 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 IGF2P01344 180 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ZNF12P17014 697 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 MSR1P21757 451 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 MDH2P40926 338 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SELPLGQ14242 412 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 MIDNQ504T8 468 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ARMC4Q5T2S8 1044 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 FAM205BPQ63HN1 556 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ZNF774Q6NX45 483 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SPATC1Q76KD6 591 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 NKAIN4Q8IVV8 208 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 PARP8Q8N3A8 854 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 OR10A6Q8NH74 314 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 MOSPD2Q8NHP6 518 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TLCD1Q96CP7 247 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 THOC1Q96FV9 657 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SAMD8Q96LT4 415 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 COG8Q96MW5 612 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 PRSS27Q9BQR3 290 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 WNT5BQ9H1J7 359 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 IL20RAQ9UHF4 553 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 LRCH1Q9Y2L9 728 aa10.94□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ARHGAP32A7KAX9 2087 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 A6NIZ1 184 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 A8MXK9 166 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 DOK2O60496 412 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 GPANK1O95872 356 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 NGFP01138 241 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 IFNA14P01570 189 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 RPS2P15880 293 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TUBG1P23258 451 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 HTR5AP47898 357 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SLC6A9P48067 706 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 RAP1BP61224 184 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 RPL27P61353 136 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SEC61A1P61619 476 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 RAP1AP62834 184 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SCRN3Q0VDG4 424 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 VMACQ2NL98 169 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SLC25A47Q6Q0C1 308 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 C17orf107Q6ZR85 190 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TSPYL5Q86VY4 417 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 BCL6BQ8N143 479 aaPredicted RBP10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 DPP10Q8N608 796 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ZNF283Q8N7M2 679 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 MAGEB18Q96M61 343 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SH3GL1Q99961 368 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 NDEL1Q9GZM8 345 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 KAT8Q9H7Z6 458 aaKnown RBP10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TMBIM4Q9HC24 238 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TUBG2Q9NRH3 451 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 C20orf141Q9NUB4 165 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 DCAF16Q9NXF7 216 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 IL19Q9UHD0 177 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 RIMS3Q9UJD0 308 aa10.93□□□□□ -0.66
TNFRSF1A-207ENST00000535958 POLR3KQ9Y2Y1 108 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms