RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 LAPTM4AQ15012 233 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 MSMPQ1L6U9 139 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 ARMCX4Q5H9R4 360 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 MTX3Q5HYI7 312 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 ARMC4Q5T2S8 1044 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 MBNL2Q5VZF2 373 aaKnown RBP11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 USP43Q70EL4 1123 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 SYT9Q86SS6 491 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 MICU2Q8IYU8 434 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 OR5L1Q8NGL2 311 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 OR51A7Q8NH64 312 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 AKR7LQ8NHP1 331 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 MOSPD2Q8NHP6 518 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 KLF14Q8TD94 323 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 IPCEF1Q8WWN9 437 aaPredicted RBP11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 GEMIN6Q8WXD5 167 aaKnown RBP11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 HDAC2Q92769 488 aaKnown RBP11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 C4orf45Q96LM5 186 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 TSPAN32Q96QS1 320 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 MRI1Q9BV20 369 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 OR2H1Q9GZK4 316 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 OR2J1Q9GZK6 312 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 RACGAP1Q9H0H5 632 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 C7orf69Q9H7B7 122 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 MAN2C1Q9NTJ4 1040 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 C20orf141Q9NUB4 165 aa11.29□□□□□ -0.6
CLSTN3-205ENST00000535452 SLC22A2O15244 555 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 PLPP2O43688 288 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 AHCYL1O43865 530 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 DOK2O60496 412 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 RGS9O75916 674 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 LYPD3O95274 346 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 IGHV1-46P01743 117 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 IGFBP1P08833 259 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 MMP7P09237 267 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 TNFRSF1BP20333 461 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 HTR5AP47898 357 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 ZNF133P52736 654 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 PSG4Q00888 419 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 FMODQ06828 376 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 KLF10Q13118 480 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 KRT72Q14CN4 511 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 IFI44LQ53G44 452 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 DNM1P34Q6PK57 102 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 NRMQ8IXM6 262 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 FAM216AQ8WUB2 273 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 FAM162AQ96A26 154 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 POM121L2Q96KW2 1035 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 SEPHS2Q99611 448 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 RERGLQ9H628 205 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 PLEK2Q9NYT0 353 aa11.28□□□□□ -0.6
CLSTN3-205ENST00000535452 LOC105371242A0A075B767 164 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 IGHMP01871 453 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 COX5BP10606 129 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 CENPAP49450 140 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 HILS1P60008 231 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 LMO4P61968 165 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 SLC27A4Q6P1M0 643 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 SLC25A47Q6Q0C1 308 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 ZNF771Q7L3S4 317 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 C1QL2Q7Z5L3 287 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 CALHM3Q86XJ0 350 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 WDFY1Q8IWB7 410 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 OFCC1Q8IZS5 231 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 MUC20Q8N307 709 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 OR2Z1Q8NG97 314 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 SGMS2Q8NHU3 365 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 ACOT11Q8WXI4 607 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 MARS2Q96GW9 593 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 ZNF570Q96NI8 536 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 DCLRE1CQ96SD1 692 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 GPA33Q99795 319 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 OR5V1Q9UGF6 321 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 RPS6KA6Q9UK32 745 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 AURKCQ9UQB9 309 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 NPTNQ9Y639 398 aa11.27□□□□□ -0.61
CLSTN3-205ENST00000535452 TRAV27A0A087WT01 109 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 LRRC30A6NM36 301 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 IFNL4K9M1U5 179 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 FBP2O00757 339 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 SGCEO43556 437 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 CCDC22O60826 627 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 IGHV2-5P01817 119 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 SBK2P0C263 348 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 IRF2P14316 349 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 MAKP20794 623 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 YAP1P46937 504 aaKnown RBP11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 RGS6P49758 472 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 GZMMP51124 257 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 LCN2P80188 198 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 GUCY1A3Q02108 690 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 AQP6Q13520 282 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 ESCO2Q56NI9 601 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 ZNF774Q6NX45 483 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 PGM2L1Q6PCE3 622 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 IGFN1Q86VF2 1251 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 ZNF101Q8IZC7 436 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 ATG16L2Q8NAA4 619 aa11.26□□□□□ -0.61
CLSTN3-205ENST00000535452 RP9Q8TA86 221 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms