RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 OR1D4P47884 311 aa14.39□□□□□ -0.11
MCF2L-232ENST00000535094 NR0B1P51843 470 aaKnown RBP14.39□□□□□ -0.11
MCF2L-232ENST00000535094 UBXN2BQ14CS0 331 aa14.39□□□□□ -0.11
MCF2L-232ENST00000535094 NKAIN2Q5VXU1 208 aa14.39□□□□□ -0.11
MCF2L-232ENST00000535094 KLHL24Q6TFL4 600 aa14.39□□□□□ -0.11
MCF2L-232ENST00000535094 TMEM200AQ86VY9 491 aa14.39□□□□□ -0.11
MCF2L-232ENST00000535094 MCATQ8IVS2 390 aaKnown RBP14.39□□□□□ -0.11
MCF2L-232ENST00000535094 OR13C9Q8NGT0 318 aa14.39□□□□□ -0.11
MCF2L-232ENST00000535094 CRB3Q9BUF7 120 aa14.39□□□□□ -0.11
MCF2L-232ENST00000535094 OR11A1Q9GZK7 315 aa14.39□□□□□ -0.11
MCF2L-232ENST00000535094 GAREM1Q9H706 876 aa14.39□□□□□ -0.11
MCF2L-232ENST00000535094 MKL2Q9ULH7 1088 aa14.39□□□□□ -0.11
MCF2L-232ENST00000535094 A0A087WV62 115 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 TMEM269A0A1B0GVZ9 245 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 STK17BO94768 372 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 WNT11O96014 354 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 ERCC1P07992 297 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-232ENST00000535094 FGF2P09038 288 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 NME2P22392 152 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 NPY4RP50391 375 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 SMCO1Q147U7 214 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 CD226Q15762 336 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 TMEM184AQ6ZMB5 413 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 NAXDQ8IW45 347 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 ELP5Q8TE02 316 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 ARL11Q969Q4 196 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 SLC25A32Q9H2D1 315 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 CHMP1AQ9HD42 196 aaPredicted RBP14.38□□□□□ -0.11
MCF2L-232ENST00000535094 PRELID3BQ9Y3B1 194 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 CSAG2Q9Y5P2 127 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 VCANP13611 3396 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 A8MXK9 166 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 LYPD3O95274 346 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 CA3P07451 260 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 SLC2A1P11166 492 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 PPP1R1AQ13522 171 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 SLC22A6Q4U2R8 563 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 FAM180AQ6UWF9 173 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 CMSS1Q9BQ75 279 aaKnown RBP14.38□□□□□ -0.11
MCF2L-232ENST00000535094 PLEKHA1Q9HB21 404 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 SDK2Q58EX2 2172 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 ZNF264O43296 627 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 SERPINA5P05154 406 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 H2BFMP0C1H6 154 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 GP1BBP13224 206 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 PDZK1IP1Q13113 114 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 KRBOX4Q5JUW0 171 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 FGGYQ96C11 551 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 NUDT22Q9BRQ3 303 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 LYRM4Q9HD34 91 aa14.38□□□□□ -0.11
MCF2L-232ENST00000535094 A0A0J9YY10 115 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 EFCAB7A8K855 629 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 GIMD1P0DJR0 217 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 PRMT2P55345 433 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 RAB38P57729 211 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 ZP2Q05996 745 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 PMPCAQ10713 525 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 EXOSC6Q5RKV6 272 aaKnown RBP14.37□□□□□ -0.11
MCF2L-232ENST00000535094 CHRDL2Q6WN34 429 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 OR5D18Q8NGL1 313 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 SLC37A2Q8TED4 501 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 TOX2Q96NM4 488 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 ST6GALNAC5Q9BVH7 336 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 ANKRD10Q9NXR5 420 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 TMED7Q9Y3B3 224 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 ZNF175Q9Y473 711 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 CYR61O00622 381 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 TO15178 435 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 PNMTP11086 282 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 NTSR1P30989 418 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 ZNF74Q16587 644 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 PAN3Q58A45 887 aaKnown RBP14.37□□□□□ -0.11
MCF2L-232ENST00000535094 ATPAF1Q5TC12 328 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-232ENST00000535094 C11orf87Q6NUJ2 197 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 OR6K3Q8NGY3 331 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 GPR119Q8TDV5 335 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 ANKRD9Q96BM1 317 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-232ENST00000535094 C4orf45Q96LM5 186 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 TGM7Q96PF1 710 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 CST11Q9H112 138 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 HHLA2Q9UM44 414 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 COA3Q9Y2R0 106 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-232ENST00000535094 ARPC3O15145 178 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 CELA2BP08218 269 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-232ENST00000535094 GNB3P16520 340 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 HRH1P35367 487 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 SERPINF1P36955 418 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 FLI1Q01543 452 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-232ENST00000535094 AWAT2Q6E213 333 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 UNQ9370/PRO34162Q6UXP9 181 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 FJX1Q86VR8 437 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 WDR13Q9H1Z4 485 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 UBQLN4Q9NRR5 601 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 AUP1Q9Y679 476 aa14.37□□□□□ -0.11
MCF2L-232ENST00000535094 H3BML4 177 aa14.36□□□□□ -0.11
MCF2L-232ENST00000535094 UPK3AO75631 287 aa14.36□□□□□ -0.11
MCF2L-232ENST00000535094 HCKP08631 526 aa14.36□□□□□ -0.11
MCF2L-232ENST00000535094 ACKR1Q16570 336 aa14.36□□□□□ -0.11
MCF2L-232ENST00000535094 ACOT7LQ6ZUV0 252 aa14.36□□□□□ -0.11
MCF2L-232ENST00000535094 MARCH1Q8TCQ1 289 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms