RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 MARS2Q96GW9 593 aaKnown RBP12.01□□□□□ -0.49
SF3B2-215ENST00000534307 PYURFQ96I23 114 aa12.01□□□□□ -0.49
SF3B2-215ENST00000534307 ZNF570Q96NI8 536 aa12.01□□□□□ -0.49
SF3B2-215ENST00000534307 RACGAP1Q9H0H5 632 aa12.01□□□□□ -0.49
SF3B2-215ENST00000534307 CHODLQ9H9P2 273 aa12.01□□□□□ -0.49
SF3B2-215ENST00000534307 HINT3Q9NQE9 182 aaKnown RBP12.01□□□□□ -0.49
SF3B2-215ENST00000534307 TIMM10BQ9Y5J6 103 aa12.01□□□□□ -0.49
SF3B2-215ENST00000534307 TENM1Q9UKZ4 2725 aa12.01□□□□□ -0.49
SF3B2-215ENST00000534307 TEX13CA0A0J9YWL9 993 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 LOC100289279A0A1B0GTE1 492 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 A0A1W2PPL8 197 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 C5orf49A4QMS7 147 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 IMPA2O14732 288 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 ARPC2O15144 300 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 TXNDC12O95881 172 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 IGHV3-13P01766 116 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 LCKP06239 509 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 CTLA4P16410 223 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 ACHEP22303 614 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 SDHAP31040 664 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 MSX2P35548 267 aaPredicted RBP12□□□□□ -0.49
SF3B2-215ENST00000534307 MAGEB1P43366 347 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 GDI2P50395 445 aaKnown RBP12□□□□□ -0.49
SF3B2-215ENST00000534307 CHN2P52757 468 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 PCBD1P61457 104 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 KRR1Q13601 381 aaKnown RBP12□□□□□ -0.49
SF3B2-215ENST00000534307 NKPD1Q17RQ9 610 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 ALKBH6Q3KRA9 238 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 SPATS1Q496A3 300 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 GPR139Q6DWJ6 353 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 FAM166AQ6J272 317 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 ZNF774Q6NX45 483 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 UGT2A3Q6UWM9 527 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 RFPL4BQ6ZWI9 263 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 OR1J1Q8NGS3 322 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 OR52J3Q8NH60 311 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 RDH5Q92781 318 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 RASD2Q96D21 266 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 RSRC1Q96IZ7 334 aaKnown RBP12□□□□□ -0.49
SF3B2-215ENST00000534307 SNX18Q96RF0 628 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 CDRT15Q96T59 188 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 WACQ9BTA9 647 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 SLCO1C1Q9NYB5 712 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 NKIRAS2Q9NYR9 191 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 VSX1Q9NZR4 365 aaPredicted RBP12□□□□□ -0.49
SF3B2-215ENST00000534307 LPAR3Q9UBY5 353 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 V9GYQ6 96 aa12□□□□□ -0.49
SF3B2-215ENST00000534307 C12orf71A8MTZ7 269 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 XKRYO14609 159 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 GMNNO75496 209 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 DCTN3O75935 186 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 ITGA2P17301 1181 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 CCNOP22674 350 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 MPV17P39210 176 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 SELENOVP59797 346 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 KRTAP24-1Q3LI83 254 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 MBNL2Q5VZF2 373 aaKnown RBP11.99□□□□□ -0.49
SF3B2-215ENST00000534307 DPY19L2P2Q6ZN68 376 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 PTCHD4Q6ZW05 846 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 ZER1Q7Z7L7 766 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 ADCK1Q86TW2 530 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 ALDH16A1Q8IZ83 802 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 GTF3AQ92664 365 aaKnown RBP11.99□□□□□ -0.49
SF3B2-215ENST00000534307 CCT8L2Q96SF2 557 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 NDEL1Q9GZM8 345 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 EMC7Q9NPA0 242 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 ZNF275Q9NSD4 429 aaPredicted RBP11.99□□□□□ -0.49
SF3B2-215ENST00000534307 IL20RAQ9UHF4 553 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 GPR160Q9UJ42 338 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 KCNS2Q9ULS6 477 aa11.99□□□□□ -0.49
SF3B2-215ENST00000534307 TGP01266 2768 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 UNC119BA6NIH7 251 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 H3BSA7 217 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 HAX1O00165 279 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 TGFAP01135 160 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 NGFP01138 241 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 COX5BP10606 129 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 GUCA1AP43080 201 aaPredicted RBP11.98□□□□□ -0.49
SF3B2-215ENST00000534307 MMP15P51511 669 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 CDH15P55291 814 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 TMEM33P57088 247 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 SMIM11AP58511 58 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 KRT72Q14CN4 511 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 PCGF3Q3KNV8 242 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 FAM120AOSQ5T036 256 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 SPATA46Q5T0L3 261 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 C1orf174Q8IYL3 243 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 DEFB107AQ8IZN7 70 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 FITM2Q8N6M3 262 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 ICA1LQ8NDH6 482 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 SLC25A40Q8TBP6 338 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 KLF14Q8TD94 323 aaPredicted RBP11.98□□□□□ -0.49
SF3B2-215ENST00000534307 IPCEF1Q8WWN9 437 aaPredicted RBP11.98□□□□□ -0.49
SF3B2-215ENST00000534307 NSMCE2Q96MF7 247 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 BEX2Q9BXY8 128 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 SYT4Q9H2B2 425 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 IL1RAPQ9NPH3 570 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 NDE1Q9NXR1 346 aa11.98□□□□□ -0.49
SF3B2-215ENST00000534307 EIF3KQ9UBQ5 218 aaKnown RBP11.98□□□□□ -0.49
SF3B2-215ENST00000534307 AURKCQ9UQB9 309 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms