RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 PTCHD4Q6ZW05 846 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 SVOPLQ8N434 492 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 OR10H5Q8NGA6 315 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 OR52E2Q8NGJ4 325 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 AKR7LQ8NHP1 331 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 TEX47Q8TBZ9 253 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 ZNF75AQ96N20 296 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 NMNAT3Q96T66 252 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 WACQ9BTA9 647 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 ZNF416Q9BWM5 594 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 OR2H1Q9GZK4 316 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 NUAK2Q9H093 628 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 RAB1BQ9H0U4 201 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 SRA1Q9HD15 236 aaKnown RBP11.56□□□□□ -0.56
CAPN1-227ENST00000533909 COA3Q9Y2R0 106 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-227ENST00000533909 A0A1W2PPW3 197 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 H3BN98 237 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 GPRIN2O60269 458 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 SOX14O95416 240 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 SNAP29O95721 258 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 HLA-DQA2P01906 255 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 INHBBP09529 407 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 HIST1H1CP16403 213 aaKnown RBP11.55□□□□□ -0.56
CAPN1-227ENST00000533909 EFNA4P52798 201 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 DSCR9P59020 149 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 PSG4Q00888 419 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 GLO1Q04760 184 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.55□□□□□ -0.56
CAPN1-227ENST00000533909 ZNF770Q6IQ21 691 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-227ENST00000533909 RGS7BPQ6MZT1 257 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-227ENST00000533909 ZNF774Q6NX45 483 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 FOXL2NBQ6ZUU3 175 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 SYT9Q86SS6 491 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 SDR9C7Q8NEX9 313 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 OR2T33Q8NG76 320 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 C11orf40Q8WZ69 217 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 MRPL24Q96A35 216 aaKnown RBP11.55□□□□□ -0.56
CAPN1-227ENST00000533909 SYT3Q9BQG1 590 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 RHNO1Q9BSD3 238 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 TSSK6Q9BXA6 273 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 DGCR6LQ9BY27 220 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 BCL2L14Q9BZR8 327 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 RPRD1BQ9NQG5 326 aaKnown RBP11.55□□□□□ -0.56
CAPN1-227ENST00000533909 PDP1Q9P0J1 537 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-227ENST00000533909 KIF17Q9P2E2 1029 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 DNAJB9Q9UBS3 223 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 DUSP13Q9UII6 198 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 GPR160Q9UJ42 338 aa11.55□□□□□ -0.56
CAPN1-227ENST00000533909 NDRG4Q9ULP0 352 aaKnown RBP11.55□□□□□ -0.56
CAPN1-227ENST00000533909 TLN2Q9Y4G6 2542 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 TCRBV3S1A0A5B6 114 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 RIIAD1A6NNX1 92 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 FAM171A2A8MVW0 826 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 DOK2O60496 412 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 DEAF1O75398 565 aaPredicted RBP11.54□□□□□ -0.56
CAPN1-227ENST00000533909 IFNGP01579 166 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 PPOXP50336 477 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 LSM6P62312 80 aaKnown RBP11.54□□□□□ -0.56
CAPN1-227ENST00000533909 COX10Q12887 443 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 TNK1Q13470 666 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 AQP6Q13520 282 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 ENDOGQ14249 297 aaKnown RBP11.54□□□□□ -0.56
CAPN1-227ENST00000533909 CARTPTQ16568 116 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 MST1LQ2TV78 715 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 SLC36A3Q495N2 470 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 UGT2A3Q6UWM9 527 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 BIVMQ86UB2 503 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 CPEB3Q8NE35 698 aaKnown RBP11.54□□□□□ -0.56
CAPN1-227ENST00000533909 PROKR2Q8NFJ6 384 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 TSSK2Q96PF2 358 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 SNX18Q96RF0 628 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 FEVQ99581 238 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 CDADC1Q9BWV3 514 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 WNT5BQ9H1J7 359 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 IL20Q9NYY1 176 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 ASH2LQ9UBL3 628 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 FZR1Q9UM11 496 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 BAIAP2Q9UQB8 552 aa11.54□□□□□ -0.56
CAPN1-227ENST00000533909 ARRDC5A6NEK1 342 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 M0R233 179 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 SGCEO43556 437 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 SYNGR3O43761 229 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 F12P00748 615 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-227ENST00000533909 MT-ND5P03915 603 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 ADRA2AP08913 450 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 CSF3P09919 207 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 POU1F1P28069 291 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 PCSK6P29122 969 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 HTR5AP47898 357 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 EVX1P49640 407 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 UCP2P55851 309 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 KLF3P57682 345 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-227ENST00000533909 NKPD1Q17RQ9 610 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 PAQR4Q8N4S7 273 aaPredicted RBP11.53□□□□□ -0.56
CAPN1-227ENST00000533909 ATG16L2Q8NAA4 619 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 OR1J1Q8NGS3 322 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 OR2T4Q8NH00 348 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 SYNPRQ8TBG9 265 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 SNX33Q8WV41 574 aa11.53□□□□□ -0.56
CAPN1-227ENST00000533909 FAM168AQ92567 244 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms