RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 H7C1Q1 480 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 GPRIN2O60269 458 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 NDUFS7O75251 213 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 E2F6O75461 281 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 HIST1H1CP16403 213 aaKnown RBP13.65□□□□□ -0.22
TSKU-204ENST00000533752 APEX1P27695 318 aaKnown RBP13.65□□□□□ -0.22
TSKU-204ENST00000533752 SELENOVP59797 346 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 PSG4Q00888 419 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 GLO1Q04760 184 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 COX10Q12887 443 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 CLEC12AQ5QGZ9 265 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 CD300LDQ6UXZ3 194 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 C1orf174Q8IYL3 243 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 SVOPLQ8N434 492 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 PAPD5Q8NDF8 572 aaKnown RBP13.65□□□□□ -0.22
TSKU-204ENST00000533752 CPEB3Q8NE35 698 aaKnown RBP13.65□□□□□ -0.22
TSKU-204ENST00000533752 OR4K13Q8NH42 304 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 NMNAT3Q96T66 252 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 RAB1BQ9H0U4 201 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 DYNLRB1Q9NP97 96 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 MYOZ1Q9NP98 299 aaPredicted RBP13.65□□□□□ -0.22
TSKU-204ENST00000533752 EMC7Q9NPA0 242 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 EIF3KQ9UBQ5 218 aaKnown RBP13.65□□□□□ -0.22
TSKU-204ENST00000533752 COA3Q9Y2R0 106 aaPredicted RBP13.65□□□□□ -0.22
TSKU-204ENST00000533752 POLR1DQ9Y2S0 133 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 ZNF469Q96JG9 3925 aaPredicted RBP13.64□□□□□ -0.23
TSKU-204ENST00000533752 M0R233 179 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 BHLHE40O14503 412 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 SSX4O60224 188 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 FKBP6O75344 327 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 F12P00748 615 aaPredicted RBP13.64□□□□□ -0.23
TSKU-204ENST00000533752 COX5BP10606 129 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 CBX1P83916 185 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 PPP1R8Q12972 351 aaKnown RBP13.64□□□□□ -0.23
TSKU-204ENST00000533752 KCNMB1Q16558 191 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 RGS7BPQ6MZT1 257 aaPredicted RBP13.64□□□□□ -0.23
TSKU-204ENST00000533752 ARL9Q6T311 187 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 DNM1P46Q6ZS02 220 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 OR2T33Q8NG76 320 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 AKR7LQ8NHP1 331 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 POM121L2Q96KW2 1035 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 DOK1Q99704 481 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 VRK1Q99986 396 aaPredicted RBP13.64□□□□□ -0.23
TSKU-204ENST00000533752 RHNO1Q9BSD3 238 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 WNT5BQ9H1J7 359 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 DNAJB9Q9UBS3 223 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 GPR160Q9UJ42 338 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 ARFGEF3Q5TH69 2177 aa13.64□□□□□ -0.23
TSKU-204ENST00000533752 IGLV1-36A0A0B4J1U3 117 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 C5orf49A4QMS7 147 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 SGCEO43556 437 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 SYNGR3O43761 229 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 DOK2O60496 412 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 DEAF1O75398 565 aaPredicted RBP13.63□□□□□ -0.23
TSKU-204ENST00000533752 LCKP06239 509 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 FAM157BP0CG42 384 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 CCL2P13500 99 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 CCNOP22674 350 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 CENPAP49450 140 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 ARHGDIAP52565 204 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 UCP2P55851 309 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.63□□□□□ -0.23
TSKU-204ENST00000533752 TNK1Q13470 666 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 C1orf146Q5VVC0 180 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 ZNF774Q6NX45 483 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 UGT2A3Q6UWM9 527 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 ZBTB46Q86UZ6 589 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 LNX2Q8N448 690 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 PAQR4Q8N4S7 273 aaPredicted RBP13.63□□□□□ -0.23
TSKU-204ENST00000533752 SDR9C7Q8NEX9 313 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 OR52E2Q8NGJ4 325 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 TEX47Q8TBZ9 253 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 NEU4Q8WWR8 484 aaPredicted RBP13.63□□□□□ -0.23
TSKU-204ENST00000533752 C11orf40Q8WZ69 217 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 SORCS2Q96PQ0 1159 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 TSSK6Q9BXA6 273 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 MRPL37Q9BZE1 423 aaKnown RBP13.63□□□□□ -0.23
TSKU-204ENST00000533752 PLA2G12AQ9BZM1 189 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 ZNF556Q9HAH1 456 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 RPRD1BQ9NQG5 326 aaKnown RBP13.63□□□□□ -0.23
TSKU-204ENST00000533752 ATPIF1Q9UII2 106 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 KLHL21Q9UJP4 597 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 B9D1Q9UPM9 204 aa13.63□□□□□ -0.23
TSKU-204ENST00000533752 A0A1W2PPW3 197 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 TMEM129A0AVI4 362 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 H3BSA7 217 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 ICMTO60725 284 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 CIB2O75838 187 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 SOX14O95416 240 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 IFNGP01579 166 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 GAAP10253 952 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 HTR5AP47898 357 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 KLF3P57682 345 aaPredicted RBP13.62□□□□□ -0.23
TSKU-204ENST00000533752 MOGQ16653 247 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 SLC36A3Q495N2 470 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 SLC35F1Q5T1Q4 408 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 CCDC121Q6ZUS5 278 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 OR6V1Q8N148 313 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 NPEPL1Q8NDH3 523 aa13.62□□□□□ -0.23
TSKU-204ENST00000533752 OR10H5Q8NGA6 315 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms