RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ZBTB46Q86UZ6 589 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 OR6V1Q8N148 313 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 LNX2Q8N448 690 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 NPEPL1Q8NDH3 523 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 SDR9C7Q8NEX9 313 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 OR1J2Q8NGS2 313 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 AKR7LQ8NHP1 331 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 DUS3LQ96G46 650 aaKnown RBP17.63■□□□□ 0.41
CCS-208ENST00000533244 POM121L2Q96KW2 1035 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 FOXN4Q96NZ1 517 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 TBC1D23Q9NUY8 699 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 B9D1Q9UPM9 204 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 PMF1-BGLAPU3KQ54 211 aa17.63■□□□□ 0.41
CCS-208ENST00000533244 MTORP42345 2549 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 OR6C68A6NDL8 312 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 VSTM5A8MXK1 200 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 GNGT2O14610 69 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 RENP00797 406 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 FOSL1P15407 271 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 STOMP27105 288 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 PCSK6P29122 969 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 APLNRP35414 380 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 RPS23P62266 143 aaKnown RBP17.62■□□□□ 0.41
CCS-208ENST00000533244 SNRPD2P62316 118 aaKnown RBP17.62■□□□□ 0.41
CCS-208ENST00000533244 OR4Q3Q8NH05 313 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 UTP4Q969X6 686 aaKnown RBP17.62■□□□□ 0.41
CCS-208ENST00000533244 MRPL24Q96A35 216 aaKnown RBP17.62■□□□□ 0.41
CCS-208ENST00000533244 DOK1Q99704 481 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 TSSK6Q9BXA6 273 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 NTN4Q9HB63 628 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 CDH20Q9HBT6 801 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 REV1Q9UBZ9 1251 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 CMAHPQ9Y471 501 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 FKBP7Q9Y680 259 aa17.62■□□□□ 0.41
CCS-208ENST00000533244 LOC100509620A0A075B734 347 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 MPZL1O95297 269 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 SOX14O95416 240 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 EVX1P49640 407 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 PPOXP50336 477 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.61■□□□□ 0.41
CCS-208ENST00000533244 AQP6Q13520 282 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 CCNIQ14094 377 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 SLC35F1Q5T1Q4 408 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 C1orf146Q5VVC0 180 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 HS3ST5Q8IZT8 346 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 OR52E2Q8NGJ4 325 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 C11orf40Q8WZ69 217 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 RERGLQ9H628 205 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 RPRD1BQ9NQG5 326 aaKnown RBP17.61■□□□□ 0.41
CCS-208ENST00000533244 ARMC1Q9NVT9 282 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 PDP1Q9P0J1 537 aaPredicted RBP17.61■□□□□ 0.41
CCS-208ENST00000533244 FBXO9Q9UK97 447 aaPredicted RBP17.61■□□□□ 0.41
CCS-208ENST00000533244 BAIAP2Q9UQB8 552 aa17.61■□□□□ 0.41
CCS-208ENST00000533244 ICMTO60725 284 aa17.6■□□□□ 0.41
CCS-208ENST00000533244 E2F6O75461 281 aa17.6■□□□□ 0.41
CCS-208ENST00000533244 COX5BP10606 129 aa17.6■□□□□ 0.41
CCS-208ENST00000533244 SCRN3Q0VDG4 424 aa17.6■□□□□ 0.41
CCS-208ENST00000533244 RAB35Q15286 201 aa17.6■□□□□ 0.41
CCS-208ENST00000533244 CLEC12BQ2HXU8 276 aa17.6■□□□□ 0.41
CCS-208ENST00000533244 ZNF774Q6NX45 483 aa17.6■□□□□ 0.41
CCS-208ENST00000533244 CCDC121Q6ZUS5 278 aa17.6■□□□□ 0.41
CCS-208ENST00000533244 ALDH16A1Q8IZ83 802 aa17.6■□□□□ 0.41
CCS-208ENST00000533244 OR2T33Q8NG76 320 aa17.6■□□□□ 0.41
CCS-208ENST00000533244 MRPL37Q9BZE1 423 aaKnown RBP17.6■□□□□ 0.41
CCS-208ENST00000533244 SRA1Q9HD15 236 aaKnown RBP17.6■□□□□ 0.41
CCS-208ENST00000533244 TRIM64A6NGJ6 449 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 TRIM64BA6NI03 449 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 DEAF1O75398 565 aaPredicted RBP17.59■□□□□ 0.41
CCS-208ENST00000533244 TIPRLO75663 272 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 GPANK1O95872 356 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 UCP2P55851 309 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 DBPQ10586 325 aaPredicted RBP17.59■□□□□ 0.41
CCS-208ENST00000533244 OTPQ5XKR4 325 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 SHQ1Q6PI26 577 aaKnown RBP17.59■□□□□ 0.41
CCS-208ENST00000533244 SVOPLQ8N434 492 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 SLC26A10Q8NG04 563 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 NRBF2Q96F24 287 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 C18orf12Q96KH6 178 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 COX4I2Q96KJ9 171 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 BDH2Q9BUT1 245 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 FN3KQ9H479 309 aa17.59■□□□□ 0.41
CCS-208ENST00000533244 FAM157BP0CG42 384 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 WNT5AP41221 380 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 GDI2P50395 445 aaKnown RBP17.58■□□□□ 0.41
CCS-208ENST00000533244 EFNA4P52798 201 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 HIST1H3AP68431 136 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 GLO1Q04760 184 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 SLC36A3Q495N2 470 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 HIST2H3PS2Q5TEC6 136 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 HIST2H3AQ71DI3 136 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 CIARTQ8N365 385 aaPredicted RBP17.58■□□□□ 0.41
CCS-208ENST00000533244 SLC37A3Q8NCC5 494 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 SORCS2Q96PQ0 1159 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 RBM4Q9BWF3 364 aaKnown RBP17.58■□□□□ 0.41
CCS-208ENST00000533244 BCL2L14Q9BZR8 327 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 ASH2LQ9UBL3 628 aa17.58■□□□□ 0.41
CCS-208ENST00000533244 NDRG4Q9ULP0 352 aaKnown RBP17.58■□□□□ 0.41
CCS-208ENST00000533244 C5orf49A4QMS7 147 aa17.57■□□□□ 0.4
CCS-208ENST00000533244 SGCEO43556 437 aa17.57■□□□□ 0.4
CCS-208ENST00000533244 TFP02787 698 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms