RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 NUFIP1Q9UHK0 495 aaKnown RBP7.31□□□□□ -1.24
NEDD8-207ENST00000533242 ZNF346Q9UL40 294 aaKnown RBP7.31□□□□□ -1.24
NEDD8-207ENST00000533242 A0A0G2JK05 382 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 A0A1W2PPK0 400 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 C17orf51A8MQB3 221 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 DEFB108AA8MXU0 73 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 MCIDASD6RGH6 385 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 PRR23D1E9PI22 279 aaPredicted RBP7.3□□□□□ -1.24
NEDD8-207ENST00000533242 FMO6PO60774 539 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 CLPSP04118 112 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 EIF4EP06730 217 aaKnown RBP7.3□□□□□ -1.24
NEDD8-207ENST00000533242 PRR23D2P0DMB1 279 aaPredicted RBP7.3□□□□□ -1.24
NEDD8-207ENST00000533242 SLC2A2P11168 524 aaPredicted RBP7.3□□□□□ -1.24
NEDD8-207ENST00000533242 HIST1H1CP16403 213 aaKnown RBP7.3□□□□□ -1.24
NEDD8-207ENST00000533242 TCEA1P23193 301 aaKnown RBP7.3□□□□□ -1.24
NEDD8-207ENST00000533242 FBXW4P57775 412 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 PPP3R1P63098 170 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 IL18Q14116 193 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 TOMM20Q15388 145 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 TBRG1Q3YBR2 411 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 ZNF613Q6PF04 617 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 ADGRE4PQ86SQ3 457 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 OAFQ86UD1 273 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 RDH10Q8IZV5 341 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 CADM2Q8N3J6 435 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 OR4K13Q8NH42 304 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 OR5W2Q8NH69 310 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 ZMYND19Q96E35 227 aaPredicted RBP7.3□□□□□ -1.24
NEDD8-207ENST00000533242 PERPQ96FX8 193 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 GNRHR2Q96P88 292 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 SLC22A4Q9H015 551 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 UBTD1Q9HAC8 227 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 RANGRFQ9HD47 186 aaPredicted RBP7.3□□□□□ -1.24
NEDD8-207ENST00000533242 PLSCR3Q9NRY6 295 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 SLC35A3Q9Y2D2 325 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 A0A0B4J203 849 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 A8MXE2 369 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 NPIPB9F8W1W9 429 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 J3QLW9 94 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 SIAH2O43255 324 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 OIP5O43482 229 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 RGS9O75916 674 aaPredicted RBP7.3□□□□□ -1.24
NEDD8-207ENST00000533242 CNOT4O95628 575 aaKnown RBP7.3□□□□□ -1.24
NEDD8-207ENST00000533242 HLA-DQB1P01920 261 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 PAX1P15863 534 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 ZNF19P17023 458 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 CRYGSP22914 178 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 PTH2RP49190 550 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 TMEM44Q2T9K0 475 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 IDNKQ5T6J7 187 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 BICRALQ6AI39 1079 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 TIGD3Q6B0B8 471 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 ZNF544Q6NX49 715 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 ZCCHC12Q6PEW1 402 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 LINC00114Q6XXX2 140 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 SCAIQ8N9R8 606 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 GATSQ8NAP1 163 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 OR52E2Q8NGJ4 325 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 AP3S1Q92572 193 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 RIT1Q92963 219 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 UPRTQ96BW1 309 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 LMF2Q9BU23 707 aaKnown RBP7.3□□□□□ -1.24
NEDD8-207ENST00000533242 TEX12Q9BXU0 123 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 CLCF1Q9UBD9 225 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 CHRNA9Q9UGM1 479 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 ZNF221Q9UK13 617 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 CSPG4Q6UVK1 2322 aa7.3□□□□□ -1.24
NEDD8-207ENST00000533242 PRR32B1ATL7 298 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 MSTNO14793 375 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 SC5DO75845 299 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 GAAP10253 952 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 PEPDP12955 493 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 MYL9P24844 172 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 PYCR1P32322 319 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 NAA10P41227 235 aaPredicted RBP7.29□□□□□ -1.24
NEDD8-207ENST00000533242 TP53I3Q53FA7 332 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 Q5BKY6 102 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 HLA-DQA1Q5Y7H0 255 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 TMEM81Q6P7N7 255 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 VASH1Q7L8A9 365 aaPredicted RBP7.29□□□□□ -1.24
NEDD8-207ENST00000533242 OR4M1Q8NGD0 313 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 OR1J4Q8NGS1 313 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 SLC7A6Q92536 515 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 EFHD2Q96C19 240 aaPredicted RBP7.29□□□□□ -1.24
NEDD8-207ENST00000533242 INTS12Q96CB8 462 aaKnown RBP7.29□□□□□ -1.24
NEDD8-207ENST00000533242 ORAI1Q96D31 301 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 PIK3IP1Q96FE7 263 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 RNF170Q96K19 258 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 WFIKKN1Q96NZ8 548 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 ERMAPQ96PL5 475 aaPredicted RBP7.29□□□□□ -1.24
NEDD8-207ENST00000533242 KCNJ15Q99712 375 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 TMEM43Q9BTV4 400 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 OR2B2Q9GZK3 357 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 TMEM27Q9HBJ8 222 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 KRCC1Q9NPI7 259 aaPredicted RBP7.29□□□□□ -1.24
NEDD8-207ENST00000533242 NPAP1Q9NZP6 1156 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 NLKQ9UBE8 527 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 PCNX3Q9H6A9 2034 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 A0A1W2PRG6 482 aa7.29□□□□□ -1.24
NEDD8-207ENST00000533242 SLC22A31A6NKX4 558 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms