RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 OR51A2Q8NGJ7 313 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 OR6S1Q8NH40 331 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 SAP25Q8TEE9 199 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 SLC25A28Q96A46 364 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 GPR137Q96N19 417 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 G6PC2Q9NQR9 355 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 TAS2R4Q9NYW5 299 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 KLRF1Q9NZS2 232 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 RARRES3Q9UL19 164 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 NPIPA1Q9UND3 350 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 H7C417 338 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 LMX1BO60663 402 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 ICMTO60725 284 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 OR2J2O76002 312 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 FCER2P06734 321 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 IGFBP3P17936 291 aaPredicted RBP13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 HSF1Q00613 529 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 NR0B2Q15466 257 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 PCK2Q16822 640 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 LYSMD4Q5XG99 296 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 SLC25A25Q6KCM7 469 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 LRFN4Q6PJG9 635 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 CPEB2Q7Z5Q1 589 aaKnown RBP13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 ZNF454Q8N9F8 522 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 OR10G3Q8NGC4 313 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 POC1BQ8TC44 478 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 CCDC74BQ96LY2 380 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 CITED4Q96RK1 184 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 MYOTQ9UBF9 498 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 MTFP1Q9UDX5 166 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 NPTNQ9Y639 398 aa13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 ASCC3Q8N3C0 2202 aaKnown RBP13.72□□□□□ -0.21
CACNA1E-208ENST00000533229 TRAV18A0A075B6X5 111 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 TMEM272A0A1B0GTI8 110 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 A0A1W2PPC1 479 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 MEIS3P1A6NDR6 274 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 LIPT2A6NK58 231 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 ZNF208O43345 1280 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 ZNF823P16415 610 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 DLX5P56178 289 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 RAB11BQ15907 218 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 CSRP2Q16527 193 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 PCGF3Q3KNV8 242 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 OR5M1Q8NGP8 315 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 DDIT4LQ96D03 193 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 DUSP23Q9BVJ7 150 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 ZNF436Q9C0F3 470 aaPredicted RBP13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 METTL17Q9H7H0 456 aaPredicted RBP13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 CHST11Q9NPF2 352 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 NPDC1Q9NQX5 325 aaPredicted RBP13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 PRMT8Q9NR22 394 aaPredicted RBP13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 B3GAT1Q9P2W7 334 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 MRPS18BQ9Y676 258 aaKnown RBP13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 R4GMQ9 66 aa13.71□□□□□ -0.21
CACNA1E-208ENST00000533229 CACNA1EQ15878 2313 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 LOC100289279A0A1B0GTE1 492 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 A0A1B0GUH1 482 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 A6NIZ1 184 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 ETV2O00321 342 aaPredicted RBP13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 RBBP9O75884 186 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 TOXO94900 526 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 NDUFB6O95139 128 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 DAP3P51398 398 aaKnown RBP13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 SUMO3P55854 103 aaPredicted RBP13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 RAP1BP61224 184 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 RAP1AP62834 184 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 ANGPT1Q15389 498 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 LGALSLQ3ZCW2 172 aaPredicted RBP13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 NHLRC1Q6VVB1 395 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 GLDNQ6ZMI3 551 aaPredicted RBP13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 NLRC3Q7RTR2 1065 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 LUZP2Q86TE4 346 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 C15orf40Q8WUR7 153 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 SLC25A44Q96H78 314 aaPredicted RBP13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 C5orf34Q96MH7 638 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 CRB3Q9BUF7 120 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 TMEM185BQ9H7F4 350 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 HEXA-AS1Q9H8Q6 139 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 OCIAD1Q9NX40 245 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 CGGBP1Q9UFW8 167 aaPredicted RBP13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 TMEM265A0A087WTH1 108 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 A0A1B0GVI7 797 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 PRAF2O60831 178 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 MFSD13AQ14CX5 517 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 HYAL4Q2M3T9 481 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 HLA-BQ31612 363 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 GLYATL3Q5SZD4 288 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 METTL11BQ5VVY1 283 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 OR4C16Q8NGL9 310 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 TTC9Q92623 222 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 THRSPQ92748 146 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 SERINC1Q9NRX5 453 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 CA10Q9NS85 328 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 EMC3Q9P0I2 261 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 PPP4R1LQ9P1A2 415 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 FBXL2Q9UKC9 423 aa13.7□□□□□ -0.22
CACNA1E-208ENST00000533229 TMEM269A0A1B0GVZ9 245 aa13.69□□□□□ -0.22
CACNA1E-208ENST00000533229 A0A1W2PQ72 361 aa13.69□□□□□ -0.22
CACNA1E-208ENST00000533229 DCDC2BA2VCK2 349 aa13.69□□□□□ -0.22
CACNA1E-208ENST00000533229 TTLL8A6PVC2 850 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms