RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SYT9Q86SS6 491 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 CPEB3Q8NE35 698 aaKnown RBP10.38□□□□□ -0.75
SSBP3-214ENST00000533209 SLC26A10Q8NG04 563 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 OR4F15Q8NGB8 312 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 OR9Q1Q8NGQ5 310 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 OR2T4Q8NH00 348 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 AKR7LQ8NHP1 331 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 SMAP2Q8WU79 429 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-214ENST00000533209 CIB1Q99828 191 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 DHRS9Q9BPW9 319 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 OSBPL10Q9BXB5 764 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 WNT5BQ9H1J7 359 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 EDARQ9UNE0 448 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 TIMM10BQ9Y5J6 103 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 RAI1Q7Z5J4 1906 aaPredicted RBP10.38□□□□□ -0.75
SSBP3-214ENST00000533209 OTOGQ6ZRI0 2925 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 IQCMA0A1B0GVH7 501 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 SURF4O15260 269 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 CD8AP01732 235 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 HMGN1P05114 100 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 GYPBP06028 91 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 ZNF3P17036 446 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 SPI1P17947 270 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 IGFBP5P24593 272 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 APEX1P27695 318 aaKnown RBP10.37□□□□□ -0.75
SSBP3-214ENST00000533209 SLC25A1P53007 311 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 NKX6-1P78426 367 aaPredicted RBP10.37□□□□□ -0.75
SSBP3-214ENST00000533209 GLO1Q04760 184 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 PLP2Q04941 152 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 PTGES3Q15185 160 aaKnown RBP10.37□□□□□ -0.75
SSBP3-214ENST00000533209 ZNF544Q6NX49 715 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.37□□□□□ -0.75
SSBP3-214ENST00000533209 DTX2Q86UW9 622 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 PQLC1Q8N2U9 271 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 PAQR4Q8N4S7 273 aaPredicted RBP10.37□□□□□ -0.75
SSBP3-214ENST00000533209 SLC30A7Q8NEW0 376 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 NUP37Q8NFH4 326 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 PROKR2Q8NFJ6 384 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 STMN2Q93045 179 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 PTP4A1Q93096 173 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 MBD6Q96DN6 1003 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 WACQ9BTA9 647 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 HCAR1Q9BXC0 346 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 C1orf198Q9H425 327 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 MED20Q9H944 212 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 MRPL22Q9NWU5 206 aaKnown RBP10.37□□□□□ -0.75
SSBP3-214ENST00000533209 LHFPL6Q9Y693 200 aa10.37□□□□□ -0.75
SSBP3-214ENST00000533209 LOC100509620A0A075B734 347 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 ERICH4A6NGS2 130 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 FAM183AA6NL82 134 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 EI24O14681 340 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 PTHP01270 115 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 ALPLP05186 524 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 CLUP10909 449 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 CCL2P13500 99 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 NR4A1P22736 598 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 TTKP33981 857 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 FABP6P51161 128 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 HIST1H3AP68431 136 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 TEKQ02763 1124 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 AQP6Q13520 282 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 HIST2H3PS2Q5TEC6 136 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 ZNF774Q6NX45 483 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 LYPD4Q6UWN0 246 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 HIST2H3AQ71DI3 136 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 OR51L1Q8NGJ5 315 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 POM121L2Q96KW2 1035 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 CCL19Q99731 98 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 RBM4BQ9BQ04 359 aaKnown RBP10.36□□□□□ -0.75
SSBP3-214ENST00000533209 TRAF4Q9BUZ4 470 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-214ENST00000533209 CA10Q9NS85 328 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 TVP23BQ9NYZ1 205 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 USE1Q9NZ43 259 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 ASH2LQ9UBL3 628 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 ENOPH1Q9UHY7 261 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 LAMP3Q9UQV4 416 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 MYO9AB2RTY4 2548 aa10.36□□□□□ -0.75
SSBP3-214ENST00000533209 CREBBPQ92793 2442 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 TVP23AA6NH52 213 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 ZAR1LA6NP61 321 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 PRR23D1E9PI22 279 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-214ENST00000533209 SGCEO43556 437 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 SNAP29O95721 258 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 BAG2O95816 211 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 HLA-DQA2P01906 255 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 PRR23D2P0DMB1 279 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-214ENST00000533209 COX5BP10606 129 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 PAICSP22234 425 aaKnown RBP10.35□□□□□ -0.75
SSBP3-214ENST00000533209 STOMP27105 288 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 APOBEC3AP31941 199 aaPredicted RBP10.35□□□□□ -0.75
SSBP3-214ENST00000533209 APLNRP35414 380 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 THBS4P35443 961 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 GGT2P36268 569 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 POLR2IP36954 125 aaKnown RBP10.35□□□□□ -0.75
SSBP3-214ENST00000533209 SCRN3Q0VDG4 424 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 SNTB2Q13425 540 aaKnown RBP10.35□□□□□ -0.75
SSBP3-214ENST00000533209 DAG1Q14118 895 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 ADIPOQQ15848 244 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 TBC1D28Q2M2D7 210 aa10.35□□□□□ -0.75
SSBP3-214ENST00000533209 DEFB113Q30KQ7 82 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms