RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	ERICH5	Q6P6B1	374 aa		13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	FOXL2NB	Q6ZUU3	175 aa		13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	CALHM3	Q86XJ0	350 aa		13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	OR8J3	Q8NGG0	315 aa		13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	POP5	Q969H6	163 aa	Known RBP	13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	THOC1	Q96FV9	657 aa	Known RBP	13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	MAGEB18	Q96M61	343 aa		13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	WNT5B	Q9H1J7	359 aa		13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ESM1	Q9NQ30	184 aa		13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	DDX28	Q9NUL7	540 aa	Known RBP	13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	KLHL21	Q9UJP4	597 aa		13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	NPTN	Q9Y639	398 aa		13.19	□□□□□ -0.3
TM9SF1-209	ENST00000530468	FBP2	O00757	339 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	SHOX2	O60902	331 aa	Predicted RBP	13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	NPPA	P01160	153 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	TUBG1	P23258	451 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	IFNA8	P32881	189 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ST3GAL3	Q11203	375 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	TTMP	Q5BVD1	217 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	MTX3	Q5HYI7	312 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	RABL3	Q5HYI8	236 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	RBMS3	Q6XE24	437 aa	Known RBP	13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	SYT9	Q86SS6	491 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	DVL3	Q92997	716 aa	Predicted RBP	13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	BPIFA2	Q96DR5	249 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	C4orf45	Q96LM5	186 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	WAC	Q9BTA9	647 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	NPHS2	Q9NP85	383 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	TUBG2	Q9NRH3	451 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	MRGBP	Q9NV56	204 aa		13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468	NDRG4	Q9ULP0	352 aa	Known RBP	13.18	□□□□□ -0.3
TM9SF1-209	ENST00000530468		A0A0G2JND7	137 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468		A6NIZ1	184 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	TIMM8A	O60220	97 aa	Predicted RBP	13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	NGF	P01138	241 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	IGHV2-70	P01814	119 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	COX5B	P10606	129 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	GSTM3	P21266	225 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	MSR1	P21757	451 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	TNFSF4	P23510	183 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	OR1E2	P47887	323 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	RAP1B	P61224	184 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	RAP1A	P62834	184 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	TNFAIP6	P98066	277 aa	Predicted RBP	13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	FOXL1	Q12952	345 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	CDK5R2	Q13319	367 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ANKDD1A	Q495B1	522 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ARMCX4	Q5H9R4	360 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	COQ5	Q5HYK3	327 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	SPIC	Q8N5J4	248 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	NPEPL1	Q8NDH3	523 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	GEMIN6	Q8WXD5	167 aa	Known RBP	13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	LRRC58	Q96CX6	371 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	PRRC1	Q96M27	445 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ZMAT3	Q9HA38	289 aa	Known RBP	13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	MSL2	Q9HCI7	577 aa		13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	PURG	Q9UJV8	347 aa	Known RBP	13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.17	□□□□□ -0.3
TM9SF1-209	ENST00000530468		A0A1W2PPL8	197 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	C12orf71	A8MTZ7	269 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	PIP5K1C	O60331	668 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	EDF1	O60869	148 aa	Known RBP	13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ABHD16A	O95870	558 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	IFI30	P13284	250 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	TNFRSF1A	P19438	455 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ZFP36	P26651	326 aa	Known RBP	13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	CTXN1	P60606	82 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ENDOG	Q14249	297 aa	Known RBP	13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	TUSC1	Q2TAM9	212 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	TMEM155	Q4W5P6	130 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ZNF774	Q6NX45	483 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	KLHL36	Q8N4N3	616 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	DEFB108B	Q8NET1	73 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	C22orf15	Q8WYQ4	148 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	SAMD8	Q96LT4	415 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	GPA33	Q99795	319 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ZNF747	Q9BV97	191 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	PATZ1	Q9HBE1	687 aa	Known RBP	13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	MAN2C1	Q9NTJ4	1040 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	TMEM106B	Q9NUM4	274 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	TBCCD1	Q9NVR7	557 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	PPIAL4A	Q9Y536	164 aa		13.16	□□□□□ -0.3
TM9SF1-209	ENST00000530468	BBIP1	A8MTZ0	92 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	FXYD1	O00168	92 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	SBK2	P0C263	348 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	HKR1	P10072	659 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	PSG7	Q13046	419 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	LRRC23	Q53EV4	343 aa	Predicted RBP	13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	CYBRD1	Q53TN4	286 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	SHISA2	Q6UWI4	295 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	DOK3	Q7L591	496 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ZNF283	Q8N7M2	679 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	CLDN22	Q8N7P3	220 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	LRRC75A	Q8NAA5	344 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	ZNF583	Q96ND8	569 aa		13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	DCLRE1C	Q96SD1	692 aa	Known RBP	13.15	□□□□□ -0.3
TM9SF1-209	ENST00000530468	POLE4	Q9NR33	117 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms