RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 OR4A15Q8NGL6 344 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 OR8K3Q8NH51 312 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 LINC01006Q8NI28 216 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 NUBPLQ8TB37 319 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 ACER1Q8TDN7 264 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 CD300LFQ8TDQ1 290 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 EEF1AKMT3Q96AZ1 226 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 PHYHIPLQ96FC7 376 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 AURKBQ96GD4 344 aaPredicted RBP2.28□□□□□ -2.04
BRCA2-203ENST00000528762 SMIM10Q96HG1 83 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 OR5B12Q96R08 314 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 GABARAPL3Q9BY60 117 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 PIGUQ9H490 435 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 HAUS4Q9H6D7 363 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 NANOGQ9H9S0 305 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 MRM3Q9HC36 420 aaKnown RBP2.28□□□□□ -2.04
BRCA2-203ENST00000528762 ACP6Q9NPH0 428 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 TMEM9BQ9NQ34 198 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 ADAM22Q9P0K1 906 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 PCYOX1Q9UHG3 505 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 NUFIP1Q9UHK0 495 aaKnown RBP2.28□□□□□ -2.04
BRCA2-203ENST00000528762 RCL1Q9Y2P8 373 aaKnown RBP2.28□□□□□ -2.04
BRCA2-203ENST00000528762 KIF25-AS1Q9Y6Z4 181 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 CROCCQ5TZA2 2017 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 AK9Q5TCS8 1911 aa2.28□□□□□ -2.04
BRCA2-203ENST00000528762 BRCA1P38398 1863 aaKnown RBP2.28□□□□□ -2.04
BRCA2-203ENST00000528762 ADAMTS9Q9P2N4 1935 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 UBN2Q6ZU65 1347 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 SERPINE3A8MV23 424 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 HIDE1A8MVS5 230 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 SMKR1H3BMG3 65 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 PEX7O00628 323 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 KMOO15229 486 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 CHMP2AO43633 222 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 DPM1O60762 260 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 NPIPB7O75200 414 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 UTS2O95399 124 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 LSM8O95777 96 aaKnown RBP2.27□□□□□ -2.05
BRCA2-203ENST00000528762 AIFM1O95831 613 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 IGLV1-47P01700 117 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 STAG3L2P0CL84 134 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 PNMA6AP0CW24 399 aaPredicted RBP2.27□□□□□ -2.05
BRCA2-203ENST00000528762 CT45A6P0DMU7 189 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 CT45A5P0DMU8 189 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 CT45A7P0DMV0 189 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 IGHV3-43DP0DP04 118 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 HRH1P35367 487 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 NUDT1P36639 197 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 GPX4P36969 197 aaPredicted RBP2.27□□□□□ -2.05
BRCA2-203ENST00000528762 CSNK1DP48730 415 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 VSX2P58304 361 aaPredicted RBP2.27□□□□□ -2.05
BRCA2-203ENST00000528762 UBE2MP61081 183 aaKnown RBP2.27□□□□□ -2.05
BRCA2-203ENST00000528762 GNB2P62879 340 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 SP4Q02446 784 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 REG3AQ06141 175 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 TCP10Q12799 353 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 SGCAQ16586 387 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 GUCA2BQ16661 112 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 ZSCAN26Q16670 478 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 ZNF630Q2M218 657 aaPredicted RBP2.27□□□□□ -2.05
BRCA2-203ENST00000528762 CT45A1Q5HYN5 189 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 ANKRD22Q5VYY1 191 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 SLC25A25Q6KCM7 469 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 ZNF621Q6ZSS3 439 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 LINC00173Q6ZV60 143 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 NPBQ8NG41 125 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 OR6X1Q8NH79 312 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 CT45A3Q8NHU0 189 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 LKAAEAR1Q8TD35 194 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 SLC35E1Q96K37 410 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 C9orf72Q96LT7 481 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 IMMP1LQ96LU5 166 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 TSSK3Q96PN8 268 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 CSPG4P5Q96PW8 444 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 TMEM175Q9BSA9 504 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 STMN4Q9H169 189 aaPredicted RBP2.27□□□□□ -2.05
BRCA2-203ENST00000528762 BEX1Q9HBH7 125 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 ZC4H2Q9NQZ6 224 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 CTPS2Q9NRF8 586 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 ABCB10Q9NRK6 738 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 AGPAT4Q9NRZ5 378 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 CLN6Q9NWW5 311 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 SAR1BQ9Y6B6 198 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 CAMTA1Q9Y6Y1 1673 aa2.27□□□□□ -2.05
BRCA2-203ENST00000528762 TDRD6O60522 2096 aaKnown RBP2.26□□□□□ -2.05
BRCA2-203ENST00000528762 A0A1B0GW55 424 aa2.26□□□□□ -2.05
BRCA2-203ENST00000528762 NUPL2O15504 423 aaKnown RBP2.26□□□□□ -2.05
BRCA2-203ENST00000528762 ERI3O43414 337 aaKnown RBP2.26□□□□□ -2.05
BRCA2-203ENST00000528762 GMDSO60547 372 aa2.26□□□□□ -2.05
BRCA2-203ENST00000528762 FKBP6O75344 327 aa2.26□□□□□ -2.05
BRCA2-203ENST00000528762 FLOT1O75955 427 aa2.26□□□□□ -2.05
BRCA2-203ENST00000528762 RAB3DO95716 219 aa2.26□□□□□ -2.05
BRCA2-203ENST00000528762 MOSP00540 346 aa2.26□□□□□ -2.05
BRCA2-203ENST00000528762 MBP02144 154 aa2.26□□□□□ -2.05
BRCA2-203ENST00000528762 TPM1P09493 284 aa2.26□□□□□ -2.05
BRCA2-203ENST00000528762 UBTFL6P0CB48 400 aaPredicted RBP2.26□□□□□ -2.05
BRCA2-203ENST00000528762 DUX4L2P0CJ85 424 aa2.26□□□□□ -2.05
BRCA2-203ENST00000528762 DUX4L3P0CJ86 424 aa2.26□□□□□ -2.05
BRCA2-203ENST00000528762 DUX4L4P0CJ87 422 aa2.26□□□□□ -2.05
BRCA2-203ENST00000528762 DUX4L5P0CJ88 424 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms