RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-212	ENST00000527805	TRIL	Q7L0X0	811 aa		13.35	□□□□□ -0.27
ATM-212	ENST00000527805	TRAPPC6B	Q86SZ2	158 aa		13.35	□□□□□ -0.27
ATM-212	ENST00000527805	ACBD4	Q8NC06	268 aa		13.35	□□□□□ -0.27
ATM-212	ENST00000527805	OR5H2	Q8NGV7	314 aa		13.35	□□□□□ -0.27
ATM-212	ENST00000527805	OR52N5	Q8NH56	324 aa		13.35	□□□□□ -0.27
ATM-212	ENST00000527805	OR51E1	Q8TCB6	317 aa		13.35	□□□□□ -0.27
ATM-212	ENST00000527805	PHYHIP	Q92561	330 aa		13.35	□□□□□ -0.27
ATM-212	ENST00000527805	KCNIP3	Q9Y2W7	256 aa		13.35	□□□□□ -0.27
ATM-212	ENST00000527805	SCN2A	Q99250	2005 aa		13.35	□□□□□ -0.27
ATM-212	ENST00000527805	PLXNA3	P51805	1871 aa		13.35	□□□□□ -0.27
ATM-212	ENST00000527805	LOC107986453	A0A1B0GWG9	222 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	MEIS3P1	A6NDR6	274 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	OR7C1	O76099	320 aa	Predicted RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	PTGS2	P35354	604 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	MAGEA5	P43359	124 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	CXADR	P78310	365 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	SFXN4	Q6P4A7	337 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	CD300LD	Q6UXZ3	194 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	C11orf40	Q8WZ69	217 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	PIGT	Q969N2	578 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	ABHD6	Q9BV23	337 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	ST6GALNAC5	Q9BVH7	336 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	METTL9	Q9H1A3	318 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	NLK	Q9UBE8	527 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	RABL2B	Q9UNT1	228 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	SESN1	Q9Y6P5	492 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	ADH6	P28332	368 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	CD40LG	P29965	261 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	CD83	Q01151	205 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	OR2A2	Q6IF42	318 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	LRRC28	Q86X40	367 aa	Predicted RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	PLPP7	Q8NBV4	271 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	SIGLEC11	Q96RL6	698 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	SLC5A7	Q9GZV3	580 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	PIGL	Q9Y2B2	252 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	RAB40AL	P0C0E4	278 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	APEH	P13798	732 aa	Known RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	CCBE1	Q6UXH8	406 aa	Predicted RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	ADGRG3	Q86Y34	549 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	OR8D4	Q8NGM9	314 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	HAVCR1	Q96D42	359 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	FOXB1	Q99853	325 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	FGF20	Q9NP95	211 aa	Predicted RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	GDF2	Q9UK05	429 aa	Predicted RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	ALPK2	Q86TB3	2170 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	NOTCH4	Q99466	2003 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	C5orf49	A4QMS7	147 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	SRM	P19623	302 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	ZNF93	P35789	620 aa	Predicted RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	GP2	P55259	537 aa	Known RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	LSM11	P83369	360 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	CCDC58	Q4VC31	144 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	OR6Q1	Q8NGQ2	317 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	KCTD12	Q96CX2	325 aa	Known RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	DCLRE1C	Q96SD1	692 aa	Known RBP	13.34	□□□□□ -0.27
ATM-212	ENST00000527805	OR14J1	Q9UGF5	321 aa		13.34	□□□□□ -0.27
ATM-212	ENST00000527805	OR6C68	A6NDL8	312 aa		13.33	□□□□□ -0.27
ATM-212	ENST00000527805	ARR3	P36575	388 aa		13.33	□□□□□ -0.27
ATM-212	ENST00000527805	PTH2R	P49190	550 aa		13.33	□□□□□ -0.27
ATM-212	ENST00000527805	INSM1	Q01101	510 aa	Predicted RBP	13.33	□□□□□ -0.27
ATM-212	ENST00000527805	USP51	Q70EK9	711 aa		13.33	□□□□□ -0.27
ATM-212	ENST00000527805	PRR18	Q8N4B5	295 aa		13.33	□□□□□ -0.27
ATM-212	ENST00000527805	SLCO5A1	Q9H2Y9	848 aa		13.33	□□□□□ -0.27
ATM-212	ENST00000527805	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.33	□□□□□ -0.27
ATM-212	ENST00000527805	TBC1D24	Q9ULP9	559 aa		13.33	□□□□□ -0.27
ATM-212	ENST00000527805	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.33	□□□□□ -0.27
ATM-212	ENST00000527805	MASP2	O00187	686 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	DLL1	O00548	723 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	PLPP3	O14495	311 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	HOXB9	P17482	250 aa	Predicted RBP	13.33	□□□□□ -0.28
ATM-212	ENST00000527805	ACHE	P22303	614 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	CD96	P40200	585 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	RAC3	P60763	192 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	SLC17A1	Q14916	467 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	GLYATL3	Q5SZD4	288 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	RAB12	Q6IQ22	244 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	STEAP2	Q8NFT2	490 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	TRIM63	Q969Q1	353 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	KCNN3	Q9UGI6	736 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	SLC22A13	Q9Y226	551 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	C19orf67	A6NJJ6	358 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	ANXA3	P12429	323 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	STOM	P27105	288 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	UGT2B10	P36537	528 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	ZNF136	P52737	540 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	EGR3	Q06889	387 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	SLC22A24	Q8N4F4	322 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	FAM71C	Q8NEG0	241 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	TMEM59	Q9BXS4	323 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	ZNF700	Q9H0M5	742 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	SLCO1C1	Q9NYB5	712 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	FOXJ2	Q9P0K8	574 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	HIF3A	Q9Y2N7	669 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	TCF20	Q9UGU0	1960 aa	Known RBP	13.33	□□□□□ -0.28
ATM-212	ENST00000527805	SULT1C4	O75897	302 aa		13.33	□□□□□ -0.28
ATM-212	ENST00000527805	RNPS1	Q15287	305 aa	Known RBP	13.33	□□□□□ -0.28
ATM-212	ENST00000527805	DOK3	Q7L591	496 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms