RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 MTNR1BP49286 362 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 DAP3P51398 398 aaKnown RBP16.66■□□□□ 0.26
SMPD1-203ENST00000527275 RAP1BP61224 184 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 RAP1AP62834 184 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 ACSM3Q53FZ2 586 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 KRTCAP3Q53RY4 240 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 NHLRC1Q6VVB1 395 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 SLC35D2Q76EJ3 337 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 CHMP1BQ7LBR1 199 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 DPY19L4Q7Z388 723 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 UEVLDQ8IX04 471 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 FNDC9Q8TBE3 224 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 CHPT1Q8WUD6 406 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 ASB10Q8WXI3 467 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 TXNDC15Q96J42 360 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 PPIL3Q9H2H8 161 aaKnown RBP16.66■□□□□ 0.26
SMPD1-203ENST00000527275 IGLV1-36A0A0B4J1U3 117 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 NPIPB13A6NJU9 1138 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 NPIPB4C9JG80 1138 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 NCR1O76036 304 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 VAMP5O95183 116 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 HLA-DQA2P01906 255 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 CD1AP06126 327 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 CTLA4P16410 223 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 BLVRAP53004 296 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 SLC17A1Q14916 467 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 ST3GAL2Q16842 350 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 DCDC5Q6ZRR9 648 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 FCRLAQ7L513 359 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 FGD2Q7Z6J4 655 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 LAX1Q8IWV1 398 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 CENPSQ8N2Z9 138 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 OR5M9Q8NGP3 310 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 ABHD3Q8WU67 409 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 ABCB9Q9NP78 766 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 ASF1BQ9NVP2 202 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 TMEM14AQ9Y6G1 99 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 OR14I1A6ND48 311 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 TRAF3IP2O43734 574 aaPredicted RBP16.65■□□□□ 0.26
SMPD1-203ENST00000527275 UPK1BO75841 260 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 SERPINA3P01011 423 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 ALOX5APP20292 161 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 ETFDHQ16134 617 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 FAM27D1Q5T7N8 215 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 EGFL6Q8IUX8 553 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 FOXN4Q96NZ1 517 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 WDFY2Q96P53 400 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 ABCB10Q9NRK6 738 aa16.65■□□□□ 0.26
SMPD1-203ENST00000527275 ZGRF1Q86YA3 2104 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 LOC110117498-PIK3R3F6TDL0 507 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 AQP8O94778 261 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 OR8G3PP0DMU2 310 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 CRABP1P29762 137 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 RPS27P42677 84 aaKnown RBP16.64■□□□□ 0.25
SMPD1-203ENST00000527275 TDGF1P3P51864 188 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 FAM220AQ7Z4H9 259 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 WDFY1Q8IWB7 410 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 YIPF7Q8N8F6 280 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 OR13C5Q8NGS8 318 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 THEM6Q8WUY1 208 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 EMC6Q9BV81 110 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 MRM2Q9UI43 246 aaKnown RBP16.64■□□□□ 0.25
SMPD1-203ENST00000527275 MCTS1Q9ULC4 181 aaKnown RBP16.64■□□□□ 0.25
SMPD1-203ENST00000527275 SLC35F4A4IF30 521 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 ZNF593O00488 134 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-203ENST00000527275 MAGEB3O15480 346 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 TBX1O43435 398 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 KRT8P05787 483 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 ZNF181Q2M3W8 571 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 OR9K2Q8NGE7 335 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 ZNF775Q96BV0 537 aaPredicted RBP16.64■□□□□ 0.25
SMPD1-203ENST00000527275 PDCD1LG2Q9BQ51 273 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 SLX1AQ9BQ83 275 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 DAPK2Q9UIK4 370 aa16.64■□□□□ 0.25
SMPD1-203ENST00000527275 KALRNO60229 2985 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 ZNF716A6NP11 495 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 TTLL8A6PVC2 850 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 PHYHO14832 338 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 CYTIPO60759 359 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 RPP14O95059 124 aaKnown RBP16.63■□□□□ 0.25
SMPD1-203ENST00000527275 SYNGR4O95473 234 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 EGR3Q06889 387 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 POU4F3Q15319 338 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 DDI2Q5TDH0 399 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 LIPNQ5VXI9 398 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 FAM205BPQ63HN1 556 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 ABLIM2Q6H8Q1 611 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 PAMR1Q6UXH9 720 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 CREB3L2Q70SY1 520 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 OTOSQ8NHW6 89 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 RNF128Q8TEB7 428 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 RNF166Q96A37 237 aaPredicted RBP16.63■□□□□ 0.25
SMPD1-203ENST00000527275 ZNF385AQ96PM9 386 aaKnown RBP16.63■□□□□ 0.25
SMPD1-203ENST00000527275 ATF6BQ99941 703 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 SF3B5Q9BWJ5 86 aaKnown RBP16.63■□□□□ 0.25
SMPD1-203ENST00000527275 MIXL1Q9H2W2 232 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 MRPL22Q9NWU5 206 aaKnown RBP16.63■□□□□ 0.25
SMPD1-203ENST00000527275 IKZF2Q9UKS7 526 aa16.63■□□□□ 0.25
SMPD1-203ENST00000527275 GPRIN2O60269 458 aa16.62■□□□□ 0.25
SMPD1-203ENST00000527275 UPK3AO75631 287 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms