RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CD40P25942 277 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 CALCRP30988 508 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF83P51522 516 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 HCCSP53701 268 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 AQP4P55087 323 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 ISL1P61371 349 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 SNRPGP62308 76 aaKnown RBP9.35□□□□□ -0.91
NEDD8-205ENST00000527046 SPOCK1Q08629 439 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 KEAP1Q14145 624 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 RAB39AQ14964 217 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 C3orf36Q3SXR2 165 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 TEX30Q5JUR7 227 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 FBXW10Q5XX13 1052 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 SLC18B1Q6NT16 456 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 CORO6Q6QEF8 472 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 PAQR4Q8N4S7 273 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-205ENST00000527046 OR8J1Q8NGP2 316 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 SMAP2Q8WU79 429 aaPredicted RBP9.35□□□□□ -0.91
NEDD8-205ENST00000527046 TRUB1Q8WWH5 349 aaKnown RBP9.35□□□□□ -0.91
NEDD8-205ENST00000527046 PLPPR2Q96GM1 343 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 AMELYQ99218 206 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 OR2H1Q9GZK4 316 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 OR51V1Q9H2C8 321 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 ENOPH1Q9UHY7 261 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 ABCA4P78363 2273 aa9.35□□□□□ -0.91
NEDD8-205ENST00000527046 HEATR1Q9H583 2144 aaKnown RBP9.35□□□□□ -0.91
NEDD8-205ENST00000527046 ANKHD1Q8IWZ3 2542 aaKnown RBP9.35□□□□□ -0.91
NEDD8-205ENST00000527046 PRR32B1ATL7 298 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 SHISA9B4DS77 424 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 RER1O15258 196 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 PRODHO43272 600 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 SYNGR3O43761 229 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 SERPINA5P05154 406 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 ADRA2AP08913 450 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 CECR9P0C854 216 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 GSTT1P30711 240 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 UBE2NP61088 152 aaKnown RBP9.34□□□□□ -0.91
NEDD8-205ENST00000527046 HGFACQ04756 655 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 BSPH1Q075Z2 132 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 APOFQ13790 326 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 OCLNQ16625 522 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 MSMPQ1L6U9 139 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 GSG1Q2KHT4 349 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 KRTAP27-1Q3LI81 207 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 PABPC1L2AQ5JQF8 200 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF691Q5VV52 312 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 NXNL2Q5VZ03 156 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 ALKBH2Q6NS38 261 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF774Q6NX45 483 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 MEPCEQ7L2J0 689 aaKnown RBP9.34□□□□□ -0.91
NEDD8-205ENST00000527046 SLC16A14Q7RTX9 510 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 SYT9Q86SS6 491 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 LINC00346Q8IVM7 164 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 DHRSXQ8N5I4 330 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 AKR7LQ8NHP1 331 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 FAM81AQ8TBF8 368 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 FBLIM1Q8WUP2 373 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 NEUROG1Q92886 237 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 MUCL1Q96DR8 90 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 ZMYND19Q96E35 227 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-205ENST00000527046 C14orf79Q96F83 325 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 POM121L2Q96KW2 1035 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 ZNF582Q96NG8 517 aaPredicted RBP9.34□□□□□ -0.91
NEDD8-205ENST00000527046 SLC38A2Q96QD8 506 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 RASSF1Q9NS23 344 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 HAO2Q9NYQ3 351 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 MOKQ9UQ07 419 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 KLHDC2Q9Y2U9 406 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 TIMM10BQ9Y5J6 103 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 GMPPBQ9Y5P6 360 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 COMMD3-BMI1R4GMX3 469 aa9.34□□□□□ -0.91
NEDD8-205ENST00000527046 CYSRT1A8MQ03 144 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 H0YAE9 185 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 J3QRE1 110 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 M0R1B8 84 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 ZNF593O00488 134 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-205ENST00000527046 SELENOFO60613 162 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 ENTPD6O75354 484 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 UBL3O95164 117 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 CD79AP11912 226 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 CCL2P13500 99 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 COX6B1P14854 86 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 FMO3P31513 532 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 ARR3P36575 388 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 IDH3GP51553 393 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-205ENST00000527046 NAAAQ02083 359 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 GLO1Q04760 184 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 GGTLC2Q14390 218 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 SLC35D3Q5M8T2 416 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 DNM1P34Q6PK57 102 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 CFAP77Q6ZQR2 320 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 VASH1Q7L8A9 365 aaPredicted RBP9.33□□□□□ -0.92
NEDD8-205ENST00000527046 DPPA2Q7Z7J5 298 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 PROKR2Q8NFJ6 384 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 ST7LQ8TDW4 575 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 MARVELD3Q96A59 401 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 WACQ9BTA9 647 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 ADI1Q9BV57 179 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 PLEKHF2Q9H8W4 249 aa9.33□□□□□ -0.92
NEDD8-205ENST00000527046 ADGRL4Q9HBW9 690 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms