RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 ZNF704Q6ZNC4 412 aaPredicted RBP19.04■□□□□ 0.64
VPS28-205ENST00000526204 BIVMQ86UB2 503 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 CLEC1AQ8NC01 280 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 STT3BQ8TCJ2 826 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 ASB10Q8WXI3 467 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 SLC7A5P2Q9GIP4 190 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 TAS2R4Q9NYW5 299 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 GLTPQ9NZD2 209 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 A0A0A6YYH2 397 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 RPS10-NUDT3A0A1W2PQS6 291 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 A6NJ64 397 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 RLN1P04808 185 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 HLA-DOBP13765 273 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 ACHEP22303 614 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 AFF3P51826 1226 aaKnown RBP19.04■□□□□ 0.64
VPS28-205ENST00000526204 GUCA2AQ02747 115 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 OPCMLQ14982 345 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 GLYATL3Q5SZD4 288 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 RHBDD2Q6NTF9 364 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 COX15Q7KZN9 410 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 TDHQ8IZJ6 230 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 SLC25A45Q8N413 288 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 SLCO5A1Q9H2Y9 848 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 SCPEP1Q9HB40 452 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 SUSD2Q9UGT4 822 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 EMC9Q9Y3B6 208 aa19.04■□□□□ 0.64
VPS28-205ENST00000526204 TUBAL3A6NHL2 446 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 MPZL1O95297 269 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 LPLP06858 475 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 DNASE1L1P49184 302 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 ARRB1P49407 418 aaPredicted RBP19.03■□□□□ 0.64
VPS28-205ENST00000526204 POU4F3Q15319 338 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 CSRP2Q16527 193 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 STEAP1BQ6NZ63 245 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 SHISA6Q6ZSJ9 500 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 MDGA2Q7Z553 956 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 APCDD1LQ8NCL9 501 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 OR4D10Q8NGI6 311 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 OR51S1Q8NGJ8 323 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 OR13C3Q8NGS6 347 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 SLC22A11Q9NSA0 550 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 PPIEQ9UNP9 301 aaKnown RBP19.03■□□□□ 0.64
VPS28-205ENST00000526204 TP53BP1Q12888 1972 aaPredicted RBP19.03■□□□□ 0.64
VPS28-205ENST00000526204 IGLV3-12A0A075B6K2 115 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 L7N2F9 121 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 ZNF208O43345 1280 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 RGS11O94810 467 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 CRYZL1O95825 349 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 CD3DP04234 171 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 GABRA1P14867 456 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 CAPZA1P52907 286 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 OR5M10Q6IEU7 315 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 DCXRQ7Z4W1 244 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 BPHLQ86WA6 291 aaPredicted RBP19.03■□□□□ 0.64
VPS28-205ENST00000526204 KDM8Q8N371 416 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 NUBPLQ8TB37 319 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 DNASE2BQ8WZ79 361 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 DDIT4LQ96D03 193 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 KCNK17Q96T54 332 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 GSX2Q9BZM3 304 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 ALX4Q9H161 411 aaPredicted RBP19.03■□□□□ 0.64
VPS28-205ENST00000526204 UPB1Q9UBR1 384 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 OR52A1Q9UKL2 312 aa19.03■□□□□ 0.64
VPS28-205ENST00000526204 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 IGHV3-20A0A0C4DH32 117 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 SHOXO15266 292 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 BCAT2O15382 392 aaPredicted RBP19.02■□□□□ 0.64
VPS28-205ENST00000526204 TOX3O15405 576 aaPredicted RBP19.02■□□□□ 0.64
VPS28-205ENST00000526204 MELTFP08582 738 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 FBXW4P57775 412 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 TAS2R19P59542 299 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 OR7A5Q15622 319 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 TMEM244Q5VVB8 128 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 LRFN4Q6PJG9 635 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 RABEPKQ7Z6M1 372 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 CDH26Q8IXH8 852 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 OR52B4Q8NGK2 314 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 PNPLA2Q96AD5 504 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 ELMOD3Q96FG2 381 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 KCNK15Q9H427 330 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 G6PC2Q9NQR9 355 aa19.02■□□□□ 0.64
VPS28-205ENST00000526204 CFDP00746 253 aaPredicted RBP19.01■□□□□ 0.63
VPS28-205ENST00000526204 HRGP04196 525 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 IL11P20809 199 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 TOR2AQ5JU69 321 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 ANKRD37Q7Z713 158 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 ADGRE4PQ86SQ3 457 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 GABRG1Q8N1C3 465 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 NKAIN3Q8N8D7 197 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 TMEM229BQ8NBD8 167 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 NFAM1Q8NET5 270 aaPredicted RBP19.01■□□□□ 0.63
VPS28-205ENST00000526204 ST7LQ8TDW4 575 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 ASB13Q8WXK3 278 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 PTX4Q96A99 478 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 FOXRED1Q96CU9 486 aaPredicted RBP19.01■□□□□ 0.63
VPS28-205ENST00000526204 ARL5BQ96KC2 179 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 NUDT22Q9BRQ3 303 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 CHST11Q9NPF2 352 aa19.01■□□□□ 0.63
VPS28-205ENST00000526204 ZNF107Q9UII5 783 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms