RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 FARS2O95363 451 aaKnown RBP5.57□□□□□ -1.52
CD44-221ENST00000526000 SLC2A10O95528 541 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 IGHV1-46P01743 117 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 THY1P04216 161 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 HKR1P10072 659 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 ZNF250P15622 560 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 GCH1P30793 250 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 IFNA8P32881 189 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 WNT5AP41221 380 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 SEC61A1P61619 476 aaKnown RBP5.57□□□□□ -1.52
CD44-221ENST00000526000 MRPS11P82912 194 aaKnown RBP5.57□□□□□ -1.52
CD44-221ENST00000526000 LAPTM4AQ15012 233 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 ZSCAN26Q16670 478 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 DUSP7Q16829 419 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 PCGF3Q3KNV8 242 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 ZNF718Q3SXZ3 478 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 SLC36A2Q495M3 483 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 PABPC1L2AQ5JQF8 200 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 OTPQ5XKR4 325 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 GLYATQ6IB77 296 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 LCN8Q6JVE9 175 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 LEG1Q6P5S2 330 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 TTC33Q6PID6 262 aaPredicted RBP5.57□□□□□ -1.52
CD44-221ENST00000526000 C5orf46Q6UWT4 87 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 TREML4Q6UXN2 200 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 CBLL1Q75N03 491 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 ASRGL1Q7L266 308 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 ZNF627Q7L945 461 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 RANBP3LQ86VV4 465 aaPredicted RBP5.57□□□□□ -1.52
CD44-221ENST00000526000 AQP12AQ8IXF9 295 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 ADPRHL1Q8NDY3 354 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 OR4D11Q8NGI4 311 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 OR1J2Q8NGS2 313 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 OR6X1Q8NH79 312 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 DVL3Q92997 716 aaPredicted RBP5.57□□□□□ -1.52
CD44-221ENST00000526000 FAM162AQ96A26 154 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 ELMOD3Q96FG2 381 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 NSMCE2Q96MF7 247 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 RAB3IPQ96QF0 476 aaPredicted RBP5.57□□□□□ -1.52
CD44-221ENST00000526000 THTPAQ9BU02 230 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 OR2J1Q9GZK6 312 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 DENND2DQ9H6A0 471 aaPredicted RBP5.57□□□□□ -1.52
CD44-221ENST00000526000 SAP30LQ9HAJ7 183 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 C12orf10Q9HB07 376 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 CCNB1IP1Q9NPC3 277 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 EIF3KQ9UBQ5 218 aaKnown RBP5.57□□□□□ -1.52
CD44-221ENST00000526000 SLC7A7Q9UM01 511 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 AUP1Q9Y679 476 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 TENM1Q9UKZ4 2725 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 IGLV3-9A0A075B6K5 115 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 LOC100509620A0A075B734 347 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 IGKV1D-43A0A0B4J1Z2 117 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 MDFIC2A0A1B0GVS7 189 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 PLSCR5A0PG75 271 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 SLC22A23A1A5C7 686 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 DNAJC9-AS1A6NH13 148 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 MCIDASD6RGH6 385 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 J3QLI3 93 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 ARPC2O15144 300 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 RRP9O43818 475 aaKnown RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 TRMUO75648 421 aaKnown RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 CIB2O75838 187 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 LYPD3O95274 346 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 NGFP01138 241 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 MT-ND5P03915 603 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 PGA4P0DJD7 388 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 PGA3P0DJD8 388 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 ZNF32P17041 273 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 FUT1P19526 365 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 MDKP21741 143 aaPredicted RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 PRTN3P24158 256 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 STOMP27105 288 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 AQP2P41181 271 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 GDI2P50395 445 aaKnown RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 ZNF84P51523 738 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 ERVK-25P63136 954 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 SELENOWP63302 87 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 TNFAIP6P98066 277 aaPredicted RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 FMODQ06828 376 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 TOP3AQ13472 1001 aaPredicted RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 GK3PQ14409 553 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 NPTX1Q15818 432 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 ZNF74Q16587 644 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 MOGQ16653 247 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 ARMCX4Q5H9R4 360 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 KLF17Q5JT82 389 aaPredicted RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 ENTPD8Q5MY95 495 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 PRR31Q5SQ13 230 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 SWT1Q5T5J6 900 aaKnown RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 TSPYL5Q86VY4 417 aaPredicted RBP5.56□□□□□ -1.52
CD44-221ENST00000526000 DHFR2Q86XF0 187 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 ZNF101Q8IZC7 436 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 TEX29Q8N6K0 151 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 KIR3DL3Q8N743 410 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 DEFB108BQ8NET1 73 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 GPR32P1Q8NGA4 272 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 OR6T1Q8NGN1 323 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 OR6S1Q8NH40 331 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 MOSPD2Q8NHP6 518 aa5.56□□□□□ -1.52
CD44-221ENST00000526000 ABHD4Q8TB40 342 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms