RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 SHQ1Q6PI26 577 aaKnown RBP10.8□□□□□ -0.68
SMCO4-202ENST00000525141 SLC25A47Q6Q0C1 308 aa10.8□□□□□ -0.68
SMCO4-202ENST00000525141 ADCK1Q86TW2 530 aa10.8□□□□□ -0.68
SMCO4-202ENST00000525141 SVOPLQ8N434 492 aa10.8□□□□□ -0.68
SMCO4-202ENST00000525141 IL17RDQ8NFM7 739 aa10.8□□□□□ -0.68
SMCO4-202ENST00000525141 FANK1Q8TC84 345 aa10.8□□□□□ -0.68
SMCO4-202ENST00000525141 SAMD8Q96LT4 415 aa10.8□□□□□ -0.68
SMCO4-202ENST00000525141 ZNF570Q96NI8 536 aa10.8□□□□□ -0.68
SMCO4-202ENST00000525141 ERMAPQ96PL5 475 aaPredicted RBP10.8□□□□□ -0.68
SMCO4-202ENST00000525141 DENND2DQ9H6A0 471 aaPredicted RBP10.8□□□□□ -0.68
SMCO4-202ENST00000525141 TMEM38BQ9NVV0 291 aa10.8□□□□□ -0.68
SMCO4-202ENST00000525141 PDP1Q9P0J1 537 aaPredicted RBP10.8□□□□□ -0.68
SMCO4-202ENST00000525141 IL20RAQ9UHF4 553 aa10.8□□□□□ -0.68
SMCO4-202ENST00000525141 IER3IP1Q9Y5U9 82 aa10.8□□□□□ -0.68
SMCO4-202ENST00000525141 CDH10Q9Y6N8 788 aa10.8□□□□□ -0.68
SMCO4-202ENST00000525141 SLC22A23A1A5C7 686 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 A8MV72 311 aaPredicted RBP10.79□□□□□ -0.68
SMCO4-202ENST00000525141 USF1P22415 310 aaPredicted RBP10.79□□□□□ -0.68
SMCO4-202ENST00000525141 NR4A2P43354 598 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 CAPZA2P47755 286 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 GIPRP48546 466 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 MRPS34P82930 218 aaKnown RBP10.79□□□□□ -0.68
SMCO4-202ENST00000525141 MYBPC1Q00872 1141 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 DAG1Q14118 895 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 RAB39AQ14964 217 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 KPNB1Q14974 876 aaKnown RBP10.79□□□□□ -0.68
SMCO4-202ENST00000525141 MESTQ5EB52 335 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 C6orf52Q5T4I8 152 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 KRT80Q6KB66 452 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 ZFP1Q6P2D0 407 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 DPPA2Q7Z7J5 298 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 LRP11Q86VZ4 500 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 SLC22A24Q8N4F4 322 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 OR52L1Q8NGH7 329 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 SNX18Q96RF0 628 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 SH3GL3Q99963 347 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 KCNS3Q9BQ31 491 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 SOX7Q9BT81 388 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 IFT27Q9BW83 186 aa10.79□□□□□ -0.68
SMCO4-202ENST00000525141 MRPL37Q9BZE1 423 aaKnown RBP10.79□□□□□ -0.68
SMCO4-202ENST00000525141 VSX1Q9NZR4 365 aaPredicted RBP10.79□□□□□ -0.68
SMCO4-202ENST00000525141 IGKV1D-43A0A0B4J1Z2 117 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 IGHV4-61A0A0C4DH41 118 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 TEX13CA0A0J9YWL9 993 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 LYNX1G3V0Z9 82 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 BHLHE40O14503 412 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 FARS2O95363 451 aaKnown RBP10.78□□□□□ -0.68
SMCO4-202ENST00000525141 SLC2A10O95528 541 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 PPP1R3DO95685 299 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 TP53P04637 393 aaPredicted RBP10.78□□□□□ -0.68
SMCO4-202ENST00000525141 LYNX1P0DP58 116 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 NOS3P29474 1203 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 CDKN2AP42771 156 aaKnown RBP10.78□□□□□ -0.68
SMCO4-202ENST00000525141 GUCA1AP43080 201 aaPredicted RBP10.78□□□□□ -0.68
SMCO4-202ENST00000525141 PTDSS1P48651 473 aaKnown RBP10.78□□□□□ -0.68
SMCO4-202ENST00000525141 PPOXP50336 477 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 PDLIM4P50479 330 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 SNRPD2P62316 118 aaKnown RBP10.78□□□□□ -0.68
SMCO4-202ENST00000525141 FMODQ06828 376 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 KRR1Q13601 381 aaKnown RBP10.78□□□□□ -0.68
SMCO4-202ENST00000525141 CYB5R2Q6BCY4 276 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 LNX2Q8N448 690 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 PAQR4Q8N4S7 273 aaPredicted RBP10.78□□□□□ -0.68
SMCO4-202ENST00000525141 OR5K1Q8NHB7 308 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 DNAJC9Q8WXX5 260 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 RASD2Q96D21 266 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 CENPNQ96H22 339 aaPredicted RBP10.78□□□□□ -0.68
SMCO4-202ENST00000525141 NIPSNAP1Q9BPW8 284 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 EGLN3Q9H6Z9 239 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 ZNF556Q9HAH1 456 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 SIAEQ9HAT2 523 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 MYEF2Q9P2K5 600 aaKnown RBP10.78□□□□□ -0.68
SMCO4-202ENST00000525141 REV1Q9UBZ9 1251 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 BAIAP2Q9UQB8 552 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 UGT2A1Q9Y4X1 527 aa10.78□□□□□ -0.68
SMCO4-202ENST00000525141 MXRA5Q9NR99 2828 aa10.77□□□□□ -0.68
SMCO4-202ENST00000525141 SVEP1Q4LDE5 3571 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 LOC390937A0A1W2PQ73 354 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 G3V2T6 193 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 SOCS2O14508 198 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 UBL3O95164 117 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 SERPINA5P05154 406 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 ADRA2AP08913 450 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 PRKACGP22612 351 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 GLRXP35754 106 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 SNTB2Q13425 540 aaKnown RBP10.77□□□□□ -0.69
SMCO4-202ENST00000525141 ZSCAN26Q16670 478 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 FAM27BQ5VT28 67 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 FOXL2NBQ6ZUU3 175 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 PTCHD4Q6ZW05 846 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 ZDHHC13Q8IUH4 622 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 HS3ST5Q8IZT8 346 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 PYDC1Q8WXC3 89 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 LRTOMTQ8WZ04 291 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 MRPL24Q96A35 216 aaKnown RBP10.77□□□□□ -0.69
SMCO4-202ENST00000525141 WACQ9BTA9 647 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 TSSK6Q9BXA6 273 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 PLA2G12AQ9BZM1 189 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 FBXL3Q9UKT7 428 aa10.77□□□□□ -0.69
SMCO4-202ENST00000525141 CMAHPQ9Y471 501 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms