RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 GLB1L2Q8IW92 636 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 ZNF525Q8N782 197 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 OR4K13Q8NH42 304 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 POM121L2Q96KW2 1035 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 TSSK2Q96PF2 358 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 NMNAT3Q96T66 252 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 PLA2G12AQ9BZM1 189 aa17.77■□□□□ 0.44
TRIM35-203ENST00000521253 LOC100509620A0A075B734 347 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 IGHV4-30-2A0A087WSY4 118 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 DCTN6O00399 190 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 IDH3BO43837 385 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 MPZL1O95297 269 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 CCNOP22674 350 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 PCSK6P29122 969 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 DBPQ10586 325 aaPredicted RBP17.76■□□□□ 0.43
TRIM35-203ENST00000521253 RPL13AP3Q6NVV1 102 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 ZNF774Q6NX45 483 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 CLEC2AQ6UVW9 174 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 SYT9Q86SS6 491 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 LRP11Q86VZ4 500 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 ALDH16A1Q8IZ83 802 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 ZCCHC24Q8N2G6 241 aaKnown RBP17.76■□□□□ 0.43
TRIM35-203ENST00000521253 OR10H5Q8NGA6 315 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 OR10G2Q8NGC3 310 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 OR52L1Q8NGH7 329 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 OR8D4Q8NGM9 314 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 SNX18Q96RF0 628 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 SYT3Q9BQG1 590 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 REG4Q9BYZ8 158 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 IL20Q9NYY1 176 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 FBXO9Q9UK97 447 aaPredicted RBP17.76■□□□□ 0.43
TRIM35-203ENST00000521253 FKBP7Q9Y680 259 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 RTTNQ86VV8 2226 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 CSPG4Q6UVK1 2322 aa17.76■□□□□ 0.43
TRIM35-203ENST00000521253 TLN2Q9Y4G6 2542 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 TCRBV3S1A0A5B6 114 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 C5orf49A4QMS7 147 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 BHLHE40O14503 412 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 IGFBP1P08833 259 aaPredicted RBP17.75■□□□□ 0.43
TRIM35-203ENST00000521253 HOXB6P17509 224 aaKnown RBP17.75■□□□□ 0.43
TRIM35-203ENST00000521253 CRABP1P29762 137 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 EVX1P49640 407 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 GDI2P50395 445 aaKnown RBP17.75■□□□□ 0.43
TRIM35-203ENST00000521253 ERFP50548 548 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 UCP2P55851 309 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 DSCR9P59020 149 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 ERVS71-1P61550 626 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 GK3PQ14409 553 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 SLC35F1Q5T1Q4 408 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 RGS7BPQ6MZT1 257 aaPredicted RBP17.75■□□□□ 0.43
TRIM35-203ENST00000521253 DNM1P34Q6PK57 102 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 CLEC9AQ6UXN8 241 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 MAPK1IP1LQ8NDC0 245 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 SDR9C7Q8NEX9 313 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 RHNO1Q9BSD3 238 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 WACQ9BTA9 647 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 DGCR6LQ9BY27 220 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 DYNLRB1Q9NP97 96 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 MYEF2Q9P2K5 600 aaKnown RBP17.75■□□□□ 0.43
TRIM35-203ENST00000521253 B9D1Q9UPM9 204 aa17.75■□□□□ 0.43
TRIM35-203ENST00000521253 IGLV1-36A0A0B4J1U3 117 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 OR6C68A6NDL8 312 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 ATP5HO75947 161 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 GPANK1O95872 356 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 RENP00797 406 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 LCKP06239 509 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 ADRA2AP08913 450 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 WNT5AP41221 380 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 RAD52P43351 418 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 CENPAP49450 140 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 RASSF2P50749 326 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 SCRN3Q0VDG4 424 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 OR6V1Q8N148 313 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 OR52E2Q8NGJ4 325 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 C11orf40Q8WZ69 217 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 BCL2L14Q9BZR8 327 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 RAB1BQ9H0U4 201 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 SRA1Q9HD15 236 aaKnown RBP17.74■□□□□ 0.43
TRIM35-203ENST00000521253 RPRD1BQ9NQG5 326 aaKnown RBP17.74■□□□□ 0.43
TRIM35-203ENST00000521253 DUSP13Q9UII6 198 aa17.74■□□□□ 0.43
TRIM35-203ENST00000521253 FAM171A2A8MVW0 826 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 GNGT2O14610 69 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 SYNGR3O43761 229 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 FKBP6O75344 327 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 SOX14O95416 240 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 LY6G6DO95868 133 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 GAAP10253 952 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 GSTM3P21266 225 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 LSM6P62312 80 aaKnown RBP17.73■□□□□ 0.43
TRIM35-203ENST00000521253 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.73■□□□□ 0.43
TRIM35-203ENST00000521253 AQP6Q13520 282 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 KCNMB1Q16558 191 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 Q71RC1 249 aaPredicted RBP17.73■□□□□ 0.43
TRIM35-203ENST00000521253 TMEM179BQ7Z7N9 219 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 ZNF101Q8IZC7 436 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 ICA1LQ8NDH6 482 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 GIPC3Q8TF64 312 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 FAM168AQ92567 244 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 FEVQ99581 238 aa17.73■□□□□ 0.43
TRIM35-203ENST00000521253 NIPSNAP1Q9BPW8 284 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms