RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 YRDCQ86U90 279 aaKnown RBP9.14□□□□□ -0.95
MCF2-209ENST00000520602 PLCZ1Q86YW0 608 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 SLC38A9Q8NBW4 561 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 NEK7Q8TDX7 302 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 SNAPC3Q92966 411 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 LRP12Q9Y561 859 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 A0A1W2PQM1 296 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 C5orf51A6NDU8 294 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 H0YC42 278 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 GABARAPH6UMI1 98 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 GPR171O14626 319 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 TSPAN2O60636 221 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 RAF1P04049 648 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 CSTBP04080 98 aaKnown RBP9.14□□□□□ -0.95
MCF2-209ENST00000520602 QDPRP09417 244 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 CCR9P51686 369 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 MRPS10P82664 201 aaKnown RBP9.14□□□□□ -0.95
MCF2-209ENST00000520602 C2orf76Q3KRA6 126 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 NKAPLQ5M9Q1 402 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 METTL11BQ5VVY1 283 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 TTC9Q92623 222 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 SLAMF6Q96DU3 332 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 C4orf45Q96LM5 186 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 OR2M2Q96R28 347 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 KLHDC3Q9BQ90 382 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 C7orf50Q9BRJ6 194 aaKnown RBP9.14□□□□□ -0.95
MCF2-209ENST00000520602 ZNF426Q9BUY5 554 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 ULBP2Q9BZM5 246 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 RAB33BQ9H082 229 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 B3GALT5Q9Y2C3 310 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 PTPRSQ13332 1948 aa9.14□□□□□ -0.95
MCF2-209ENST00000520602 C13orf42A0A1B0GVH6 325 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 NAP1L6A6NFF2 107 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 ZNF878C9JN71 531 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 BGLAPP02818 100 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 NUP62P37198 522 aaPredicted RBP9.13□□□□□ -0.95
MCF2-209ENST00000520602 MAMSTRQ6ZN01 415 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 GPR137CQ8N3F9 429 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 AMELYQ99218 206 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 C20orf85Q9H1P6 137 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 AKIRIN1Q9H9L7 192 aaPredicted RBP9.13□□□□□ -0.95
MCF2-209ENST00000520602 TAS2R5Q9NYW4 299 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 OR5V1Q9UGF6 321 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 WIF1Q9Y5W5 379 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 ZNF736B4DX44 427 aaPredicted RBP9.13□□□□□ -0.95
MCF2-209ENST00000520602 M0R233 179 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 GDF9O60383 454 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 ERCC1P07992 297 aaPredicted RBP9.13□□□□□ -0.95
MCF2-209ENST00000520602 PGAM2P15259 253 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 ANXA7P20073 488 aaKnown RBP9.13□□□□□ -0.95
MCF2-209ENST00000520602 GDF1P27539 372 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 GABREP78334 506 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 SLC35A1P78382 337 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 PEG10Q86TG7 708 aaKnown RBP9.13□□□□□ -0.95
MCF2-209ENST00000520602 MFSD8Q8NHS3 518 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 C11orf40Q8WZ69 217 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 MRGPRX4Q96LA9 322 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 JAM3Q9BX67 310 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 KCNK15Q9H427 330 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 TRAV8-7A0A075B6U6 113 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 DISC1C4P0D8 188 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 M0QYG6 137 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 AKR7A2O43488 359 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 CRTAPO75718 401 aaPredicted RBP9.13□□□□□ -0.95
MCF2-209ENST00000520602 KDM4BO94953 1096 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 ALDOBP05062 364 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 AKAIN1P0CW23 69 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 CALCBP10092 127 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 EIF1P41567 113 aaKnown RBP9.13□□□□□ -0.95
MCF2-209ENST00000520602 CDK10Q15131 360 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 ABHD17BQ5VST6 288 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 C9orf135Q5VTT2 229 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 NR2C2APQ86WQ0 139 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 DND1Q8IYX4 353 aaKnown RBP9.13□□□□□ -0.95
MCF2-209ENST00000520602 ESX1Q8N693 406 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 OR51E1Q8TCB6 317 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 SMIM4Q8WVI0 70 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 PCNPQ8WW12 178 aaKnown RBP9.13□□□□□ -0.95
MCF2-209ENST00000520602 ST6GAL2Q96JF0 529 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 CHD9Q3L8U1 2897 aa9.13□□□□□ -0.95
MCF2-209ENST00000520602 LOC100289279A0A1B0GTE1 492 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 A0A1W2PQD3 144 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 LCATP04180 440 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 CSF1P09603 554 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 IFI6P09912 130 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 BDKRB2P30411 391 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 CXADRP78310 365 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 GUCA2AQ02747 115 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 CDH24Q86UP0 819 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 ARRDC1-AS1Q9H2J1 176 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 HRASLSQ9HDD0 168 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 ETV7Q9Y603 341 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 HEATR5AQ86XA9 2040 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 YKT6O15498 198 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 CELA2AP08217 269 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 MMP15P51511 669 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 RPS18P62269 152 aaKnown RBP9.12□□□□□ -0.95
MCF2-209ENST00000520602 CSNK2A1P68400 391 aaPredicted RBP9.12□□□□□ -0.95
MCF2-209ENST00000520602 PLAURQ03405 335 aa9.12□□□□□ -0.95
MCF2-209ENST00000520602 ISXQ2M1V0 245 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms