RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ATG4BQ9Y4P1 393 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 PEX16Q9Y5Y5 336 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 COL4A4P53420 1690 aaPredicted RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 TNS1Q9HBL0 1735 aaKnown RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 KIAA1671Q9BY89 1806 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 ANKRD36A6QL64 1941 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 LCTP09848 1927 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 CHD5Q8TDI0 1954 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 LOC285095A0A1B0GVY8 99 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 C7orf66A4D0T2 115 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF840PA6NDX5 716 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 BBIP1A8MTZ0 92 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 EFCAB9A8MZ26 197 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 E9PAM4 449 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 E2F3O00716 465 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 MRASO14807 208 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ANGPT2O15123 496 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ARPC1BO15143 372 aaKnown RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 MFSD11O43934 449 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 NDUFS6O75380 124 aaKnown RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 OR4F21O95013 312 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 LDOC1O95751 146 aaPredicted RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 NPPAP01160 153 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 JCHAINP01591 159 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 APOC1P02654 83 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 CSF3P09919 207 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 HIST1H2AGP0C0S8 130 aaPredicted RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ACSM4P0C7M7 580 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 SMIM10L2AP0DMW4 78 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 SMIM10L2BP0DMW5 78 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 GP9P14770 177 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 CD36P16671 472 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 TNNI3P19429 210 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 GADD45AP24522 165 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 MYL9P24844 172 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 HTR1EP28566 365 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 HOXA9P31269 272 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 CA5AP35218 305 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 MAGEA2P43356 314 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 BRCC3P46736 316 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 SULT1E1P49888 294 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 MEOX2P50222 304 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 KPNA2P52292 529 aaKnown RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ATXN3P54252 364 aaPredicted RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 MAP3K7CLP57077 242 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 DEFA1P59665 94 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 DEFA3P59666 94 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 C1QTNF8P60827 252 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 RAB10P61026 200 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 TRA2BP62995 288 aaKnown RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 HERV-K104P63124 156 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ACVR1Q04771 509 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 PON2Q15165 354 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 HFEQ30201 348 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF528Q3MIS6 628 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 Q3ZCU0 254 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 EIPR1Q53HC9 387 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 NHLRC3Q5JS37 347 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 NKAIN2Q5VXU1 208 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 RNLSQ5VYX0 342 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 WDR25Q64LD2 544 aaPredicted RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 SAXO2Q658L1 398 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 WSCD1Q658N2 575 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 LEMD1Q68G75 181 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 GLYATQ6IB77 296 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 OR4F3Q6IEY1 312 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 CNSTQ6PJW8 725 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 CD300LGQ6UXG3 332 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 BAIAP2L2Q6UXY1 529 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 GPR142Q7Z601 462 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 TMEM179BQ7Z7N9 219 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 SYVN1Q86TM6 617 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ADCK1Q86TW2 530 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 CYP4Z1Q86W10 505 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 HORMAD1Q86X24 394 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 HIPK1Q86Z02 1210 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 SLC22A9Q8IVM8 553 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 BBS7Q8IWZ6 715 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 MICU2Q8IYU8 434 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 C8orf59Q8N0T1 100 aaPredicted RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 CYP4Z2PQ8N1L4 340 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 UMODL1-AS1Q8N2C9 162 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ARL14Q8N4G2 192 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ARL6IP6Q8N6S5 226 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 CCNYQ8ND76 341 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 OR52K1Q8NGK4 314 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 OR4A16Q8NH70 328 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 FLVCR1-AS1Q8TAF5 88 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 RHEBL1Q8TAI7 183 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 MAGEE2Q8TD90 523 aaPredicted RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 APH1BQ8WW43 257 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ITLN1Q8WWA0 313 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 RORBQ92753 470 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 RBPMSQ93062 196 aaKnown RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 HIST1H2ACQ93077 130 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 POP5Q969H6 163 aaKnown RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 TMBIM1Q969X1 311 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 NTNG2Q96CW9 530 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 RAB39BQ96DA2 213 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms