RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ZNF524Q96C55 264 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 C7orf34Q96L11 122 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 LRGUKQ96M69 825 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 SDF2Q99470 211 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 SORT1Q99523 831 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 GATA5Q9BWX5 397 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-207ENST00000520168 TAPBPLQ9BX59 468 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 OR11A1Q9GZK7 315 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 EGLN1Q9GZT9 426 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 C1orf198Q9H425 327 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 REEP4Q9H6H4 257 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 A4GALTQ9NPC4 353 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 PNPOQ9NVS9 261 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 TAS2R1Q9NYW7 299 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 TAAR3PQ9P1P4 343 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 CGGBP1Q9UFW8 167 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-207ENST00000520168 OR5V1Q9UGF6 321 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 RASD1Q9Y272 281 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 TMED7Q9Y3B3 224 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 POLR3HQ9Y535 204 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-207ENST00000520168 SACSQ9NZJ4 4579 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 TRAV40A0A0B4J280 105 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 PGPEP1LA6NFU8 196 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 LIPT2A6NK58 231 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 A8MT66 165 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 LYPLA1O75608 230 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 UPK3AO75631 287 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 UGT2B17O75795 530 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 CIB2O75838 187 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 SNRNP70P08621 437 aaKnown RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 IGHV4-38-2P0DP08 117 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF43P17038 809 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 RHCEP18577 417 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 NCF2P19878 526 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 HPCAL1P37235 193 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 LIPAP38571 399 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 CCT3P49368 545 aaKnown RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 HTR6P50406 440 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 GMFBP60983 142 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 VBP1P61758 197 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 HTD2P86397 168 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 CAMK2DQ13557 499 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 DCTN2Q13561 401 aaKnown RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 CEACAM7Q14002 265 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 MAD2L1BPQ15013 274 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 LARS2Q15031 903 aaKnown RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 OR7A5Q15622 319 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 GPR68Q15743 365 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 CEACAM16Q2WEN9 425 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 ARHGAP11BQ3KRB8 267 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 LSM12Q3MHD2 195 aaKnown RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 ZMAT1Q5H9K5 638 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF678Q5SXM1 525 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 GPR157Q5UAW9 335 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 PGBD2Q6P3X8 592 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 UNQ6126/PRO20091Q6UXV3 157 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 Q6ZTK2 550 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 LHFPL2Q6ZUX7 228 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 RPS27LQ71UM5 84 aaKnown RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF627Q7L945 461 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 LINGO2Q7L985 606 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 NET1Q7Z628 596 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 LRP11Q86VZ4 500 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 C1orf174Q8IYL3 243 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 MUC20Q8N307 709 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 GALNT4Q8N4A0 578 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 CCNYL1Q8N7R7 359 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 TMEM99Q8N816 258 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 PIK3C3Q8NEB9 887 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 ABHD4Q8TB40 342 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF519Q8TB69 540 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 LRTOMTQ8WZ04 291 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 C11orf40Q8WZ69 217 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 TAF15Q92804 592 aaKnown RBP eCLIP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 L3HYPDHQ96EM0 354 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 OTUB1Q96FW1 271 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 AIFM2Q9BRQ8 373 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 SPXQ9BT56 116 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 CADM1Q9BY67 442 aaKnown RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 CHIAQ9BZP6 476 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 BCL2L14Q9BZR8 327 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 SLC19A3Q9BZV2 496 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF350Q9GZX5 532 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 C16orf95Q9H693 158 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 DCLRE1BQ9H816 532 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 PATZ1Q9HBE1 687 aaKnown RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 GPR35Q9HC97 309 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 B3GAT2Q9NPZ5 323 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 RPRD1BQ9NQG5 326 aaKnown RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 MMP26Q9NRE1 261 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 CYSLTR2Q9NS75 346 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 KRT84Q9NSB2 600 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 SLC6A13Q9NSD5 602 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 EXD2Q9NVH0 621 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 ATAD3AQ9NVI7 634 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 GPATCH2Q9NW75 528 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 AURKAIP1Q9NWT8 199 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-207ENST00000520168 NDE1Q9NXR1 346 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 B3GNT2Q9NY97 397 aa4.11□□□□□ -1.75
SDCBP-207ENST00000520168 TAS2R3Q9NYW6 316 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms