RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 XRCC3O43542 346 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 FADS1O60427 444 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 SRSF10O75494 262 aaKnown RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 GLSO94925 669 aaPredicted RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 AKR7A3O95154 331 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 TPOP07202 933 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 CYC1P08574 325 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 CD3GP09693 182 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 ANKRD34CP0C6C1 535 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 ADRA2CP18825 462 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 PGCP20142 388 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 PSMB1P20618 241 aaKnown RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 VAMP1P23763 118 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 GIFP27352 417 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 TACR3P29371 465 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 PSMB10P40306 273 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 HTR2BP41595 481 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 TSPAN7P41732 249 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 SRP9P49458 86 aaKnown RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 P2RX1P51575 399 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 POLR2HP52434 150 aaKnown RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 MAP2K6P52564 334 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 GFERP55789 205 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 SUMO3P55854 103 aaPredicted RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 ZNF117Q03924 483 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 SNTB2Q13425 540 aaKnown RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 SMAD4Q13485 552 aaKnown RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 CAMK2DQ13557 499 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 ERV3-1Q14264 604 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 ST3GAL2Q16842 350 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 COL28A1Q2UY09 1125 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 BTBD16Q32M84 506 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 HES5Q5TA89 166 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 BCL2L15Q5TBC7 163 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 LIPNQ5VXI9 398 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 CBLN3Q6UW01 205 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 Q6ZS52 159 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 ASB18Q6ZVZ8 466 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 FCRLAQ7L513 359 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 MAMDC2Q7Z304 686 aaPredicted RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 C9orf40Q8IXQ3 194 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 UXS1Q8NBZ7 420 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 TSTD1Q8NFU3 115 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 OR11G2Q8NGC1 345 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 OR1N1Q8NGS0 311 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 OR6K6Q8NGW6 343 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 OR5AK2Q8NH90 309 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 OTOSQ8NHW6 89 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 ZNF671Q8TAW3 534 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 PHOSPHO1Q8TCT1 267 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 LMX1AQ8TE12 382 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 RNF128Q8TEB7 428 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 SMAP2Q8WU79 429 aaPredicted RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 DNASE2BQ8WZ79 361 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 DAZLQ92904 295 aaKnown RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 TAAR8Q969N4 342 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 ZNF524Q96C55 264 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 NXPE2Q96DL1 559 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 KTI12Q96EK9 354 aaPredicted RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 S100A16Q96FQ6 103 aaKnown RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 ADAD1Q96M93 576 aaKnown RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 SORCS2Q96PQ0 1159 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 OR8B4Q96RC9 309 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 LMF1Q96S06 567 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 INTS14Q96SY0 518 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 NUDT9Q9BW91 350 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 SEMA4CQ9C0C4 833 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 WWTR1Q9GZV5 400 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 C20orf85Q9H1P6 137 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 TXNIPQ9H3M7 391 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 NCOR1P1Q9H4R4 102 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 GAREM1Q9H706 876 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 HEXA-AS1Q9H8Q6 139 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 IFT46Q9NQC8 304 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 DLL4Q9NR61 685 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 KLHL1Q9NR64 748 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 TAS2R5Q9NYW4 299 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 GRHPRQ9UBQ7 328 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 PISDQ9UG56 409 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 ZNF107Q9UII5 783 aaPredicted RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 SCP2D1Q9UJQ7 156 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 ZNF346Q9UL40 294 aaKnown RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 B9D1Q9UPM9 204 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 KLHDC2Q9Y2U9 406 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 MTCH2Q9Y6C9 303 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 SLCO1B1Q9Y6L6 691 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 KIF26BQ2KJY2 2108 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 TNRC6BQ9UPQ9 1833 aaKnown RBP4.52□□□□□ -1.69
SDC2-204ENST00000519914 IGHV1OR21-1A0A087WYE8 117 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 IGLV3-32A0A0A0MS00 114 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 A0A1B0GW55 424 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 LOC390937A0A1W2PQ73 354 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 CIB4A0PJX0 185 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 PQLC2LA1A4F0 135 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 OR2M5A3KFT3 312 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 PRSS37A4D1T9 235 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 ACOD1A6NK06 481 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 A8MVM7 634 aa4.52□□□□□ -1.69
SDC2-204ENST00000519914 IDSB3KWA1 339 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms