RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 CLOCKO15516 846 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 CHST1O43916 411 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 DPM1O60762 260 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 ENTPD5O75356 428 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 IGHDP01880 384 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 BCHEP06276 602 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 PRPS2P11908 318 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 EIF2S2P20042 333 aaKnown RBP1.78□□□□□ -2.12
SKP1-203ENST00000517625 PBLDP30039 288 aaPredicted RBP1.78□□□□□ -2.12
SKP1-203ENST00000517625 GPX4P36969 197 aaPredicted RBP1.78□□□□□ -2.12
SKP1-203ENST00000517625 CEACAM6P40199 344 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 CDKN1BP46527 198 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 ZNF138P52744 262 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 SLC25A11Q02978 314 aaKnown RBP1.78□□□□□ -2.12
SKP1-203ENST00000517625 MAB21L1Q13394 359 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 SHHQ15465 462 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 OR7A5Q15622 319 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 CHRFAM7AQ494W8 412 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 ABCA11PQ4W5N1 156 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 CARD17Q5XLA6 110 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 FBXW9Q5XUX1 488 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 SPECC1LQ69YQ0 1117 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 ARL9Q6T311 187 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 CENPQQ7L2Z9 268 aaPredicted RBP1.78□□□□□ -2.12
SKP1-203ENST00000517625 GTPBP8Q8N3Z3 284 aaPredicted RBP1.78□□□□□ -2.12
SKP1-203ENST00000517625 OR5W2Q8NH69 310 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 ZNF502Q8TBZ5 544 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 SLC7A13Q8TCU3 470 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 ACMSDQ8TDX5 336 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 DEDD2Q8WXF8 326 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 FRZBQ92765 325 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 MCUR1Q96AQ8 359 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 CAMK2N2Q96S95 79 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 TMEM165Q9HC07 324 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 DDX19AQ9NUU7 478 aaKnown RBP1.78□□□□□ -2.12
SKP1-203ENST00000517625 HRASLS2Q9NWW9 162 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 MRPS18BQ9Y676 258 aaKnown RBP1.78□□□□□ -2.12
SKP1-203ENST00000517625 SCN2AQ99250 2005 aa1.78□□□□□ -2.13
SKP1-203ENST00000517625 PTPRTO14522 1441 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 SPRR5A0A1B0GTR4 108 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 H7C0C1 242 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 FGFR1OPO95684 399 aaKnown RBP1.77□□□□□ -2.13
SKP1-203ENST00000517625 CLIC3O95833 236 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 TSPAN13O95857 204 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 FTH1P02794 183 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 RHOXF2BP0C7M4 288 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 DCKP27707 260 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 MAS1LP35410 378 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 ATP5OP48047 213 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 CX3CR1P49238 355 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 VSX2P58304 361 aaPredicted RBP1.77□□□□□ -2.13
SKP1-203ENST00000517625 KRTAP10-8P60410 259 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 LOXL1Q08397 574 aaPredicted RBP1.77□□□□□ -2.13
SKP1-203ENST00000517625 SRSF5Q13243 272 aaKnown RBP1.77□□□□□ -2.13
SKP1-203ENST00000517625 PON2Q15165 354 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 STK11Q15831 433 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 CCDC183Q5T5S1 534 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 TTC23LQ6PF05 361 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 SLC16A14Q7RTX9 510 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 ABHD12BQ7Z5M8 362 aaPredicted RBP1.77□□□□□ -2.13
SKP1-203ENST00000517625 SCD5Q86SK9 330 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 ZNF695Q8IW36 515 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 ARRDC1Q8N5I2 433 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 OR4A4PQ8NGN8 299 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 RGP1Q92546 391 aaPredicted RBP1.77□□□□□ -2.13
SKP1-203ENST00000517625 KIFAP3Q92845 792 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 NARS2Q96I59 477 aaKnown RBP1.77□□□□□ -2.13
SKP1-203ENST00000517625 RNF157Q96PX1 679 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 SLC29A1Q99808 456 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 KCNJ16Q9NPI9 418 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 ZNF355PQ9NSJ1 428 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 CCDC59Q9P031 241 aaKnown RBP1.77□□□□□ -2.13
SKP1-203ENST00000517625 ZNF222Q9UK12 451 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 VANGL2Q9ULK5 521 aa1.77□□□□□ -2.13
SKP1-203ENST00000517625 USP24Q9UPU5 2620 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 ADAMTS13Q76LX8 1427 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 IGSF9BQ9UPX0 1349 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 A6NDN8 102 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 BPY2O14599 106 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 RNF13O43567 381 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 FKBP6O75344 327 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 OR2J3O76001 311 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 YIF1AO95070 293 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 SERPINA5P05154 406 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 OR5H8P0DN80 308 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 MUC1P15941 1255 aaPredicted RBP1.76□□□□□ -2.13
SKP1-203ENST00000517625 DTYMKP23919 212 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 PMELP40967 661 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 MRPL19P49406 292 aaKnown RBP1.76□□□□□ -2.13
SKP1-203ENST00000517625 CSNK1EP49674 416 aaKnown RBP1.76□□□□□ -2.13
SKP1-203ENST00000517625 UBE2NP61088 152 aaKnown RBP1.76□□□□□ -2.13
SKP1-203ENST00000517625 STXBP1P61764 594 aaKnown RBP1.76□□□□□ -2.13
SKP1-203ENST00000517625 SYCNQ0VAF6 134 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 CDH17Q12864 832 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 LINC00483Q53H64 154 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 FAM78AQ5JUQ0 283 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 SPANXN2Q5MJ10 180 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 AVPI1Q5T686 147 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 LRRC66Q68CR7 880 aa1.76□□□□□ -2.13
SKP1-203ENST00000517625 C22orf42Q6IC83 251 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms