RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 IGHV2-70P01814 119 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 TUBG1P23258 451 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 PRTN3P24158 256 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 ARHGDIAP52565 204 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 PCBD1P61457 104 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 CD47Q08722 323 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 CDK5R2Q13319 367 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 PIN1Q13526 163 aaPredicted RBP12.69□□□□□ -0.38
DDR1-278ENST00000515233 SPRNQ5BIV9 151 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 MTX3Q5HYI7 312 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 NANOGP8Q6NSW7 305 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 RBMS3Q6XE24 437 aaKnown RBP12.69□□□□□ -0.38
DDR1-278ENST00000515233 FOXL2NBQ6ZUU3 175 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 RFPL4BQ6ZWI9 263 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 DOK3Q7L591 496 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 ZER1Q7Z7L7 766 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 SYT9Q86SS6 491 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 DEFB108BQ8NET1 73 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 ABHD4Q8TB40 342 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 GEMIN6Q8WXD5 167 aaKnown RBP12.69□□□□□ -0.38
DDR1-278ENST00000515233 NSMAFQ92636 917 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 SAMD8Q96LT4 415 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 GPA33Q99795 319 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 WACQ9BTA9 647 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 ALG12Q9BV10 488 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 PATZ1Q9HBE1 687 aaKnown RBP12.69□□□□□ -0.38
DDR1-278ENST00000515233 MSL2Q9HCI7 577 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 MMP26Q9NRE1 261 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 TUBG2Q9NRH3 451 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 PURGQ9UJV8 347 aaKnown RBP12.69□□□□□ -0.38
DDR1-278ENST00000515233 NUP50Q9UKX7 468 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 MED31Q9Y3C7 131 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 PKD1L1Q8TDX9 2849 aa12.69□□□□□ -0.38
DDR1-278ENST00000515233 MGAM2Q2M2H8 2515 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 TRAPPC2LH3BP13 241 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 IGHMP01871 453 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 SBK2P0C263 348 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 LAP3P28838 519 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 GUCA1AP43080 201 aaPredicted RBP12.68□□□□□ -0.38
DDR1-278ENST00000515233 SLC6A9P48067 706 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 RPL27P61353 136 aaKnown RBP12.68□□□□□ -0.38
DDR1-278ENST00000515233 TNFAIP6P98066 277 aaPredicted RBP12.68□□□□□ -0.38
DDR1-278ENST00000515233 PSG7Q13046 419 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 ZNF154Q13106 437 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 TMEM155Q4W5P6 130 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 ALG10Q5BKT4 473 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 ARL9Q6T311 187 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 LRRC28Q86X40 367 aaPredicted RBP12.68□□□□□ -0.38
DDR1-278ENST00000515233 CALHM3Q86XJ0 350 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 ZNF283Q8N7M2 679 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 SIGLECL1Q8N7X8 197 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 SH3GL1Q99961 368 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 ZMAT3Q9HA38 289 aaKnown RBP12.68□□□□□ -0.38
DDR1-278ENST00000515233 NPHS2Q9NP85 383 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 TMEM106BQ9NUM4 274 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 TBCCD1Q9NVR7 557 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 PLEK2Q9NYT0 353 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 EGFL7Q9UHF1 273 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 AUP1Q9Y679 476 aa12.68□□□□□ -0.38
DDR1-278ENST00000515233 COX5BP10606 129 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 ZNF12P17014 697 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 TNFRSF1AP19438 455 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 TNFRSF1BP20333 461 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 CYLC2Q14093 348 aaPredicted RBP12.67□□□□□ -0.38
DDR1-278ENST00000515233 ARMCX4Q5H9R4 360 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 KLF17Q5JT82 389 aaPredicted RBP12.67□□□□□ -0.38
DDR1-278ENST00000515233 METTL21CQ5VZV1 264 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 FAM205BPQ63HN1 556 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 KLHL36Q8N4N3 616 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 SPICQ8N5J4 248 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 DCLRE1CQ96SD1 692 aaKnown RBP12.67□□□□□ -0.38
DDR1-278ENST00000515233 MAN2C1Q9NTJ4 1040 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 DCAF16Q9NXF7 216 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 ZNF69Q9UC07 566 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 NDRG4Q9ULP0 352 aaKnown RBP12.67□□□□□ -0.38
DDR1-278ENST00000515233 INSIG2Q9Y5U4 225 aa12.67□□□□□ -0.38
DDR1-278ENST00000515233 A8MXK9 166 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 FBP2O00757 339 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 TIMM8AO60220 97 aaPredicted RBP12.66□□□□□ -0.38
DDR1-278ENST00000515233 SHOX2O60902 331 aaPredicted RBP12.66□□□□□ -0.38
DDR1-278ENST00000515233 IFNA14P01570 189 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 TNFSF4P23510 183 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 OR1E2P47887 323 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 CTXN1P60606 82 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 ST3GAL3Q11203 375 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 ENDOGQ14249 297 aaKnown RBP12.66□□□□□ -0.38
DDR1-278ENST00000515233 ANKDD1AQ495B1 522 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 ZNF774Q6NX45 483 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 ZNF771Q7L3S4 317 aaPredicted RBP12.66□□□□□ -0.38
DDR1-278ENST00000515233 CLDN22Q8N7P3 220 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 LRRC75AQ8NAA5 344 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 OR8J3Q8NGG0 315 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 DYDC1Q8WWB3 177 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 BPIFA2Q96DR5 249 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 ATP6V1G3Q96LB4 118 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 C1orf147Q96MC9 270 aaPredicted RBP12.66□□□□□ -0.38
DDR1-278ENST00000515233 ECSITQ9BQ95 431 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 IL19Q9UHD0 177 aa12.66□□□□□ -0.38
DDR1-278ENST00000515233 DNAJC9-AS1A6NH13 148 aa12.65□□□□□ -0.38
DDR1-278ENST00000515233 A6NIZ1 184 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms