RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ELF4Q99607 663 aaPredicted RBP8.74□□□□□ -1.01
VCAN-210ENST00000513960 WDR77Q9BQA1 342 aaPredicted RBP8.74□□□□□ -1.01
VCAN-210ENST00000513960 MRPS2Q9Y399 296 aaKnown RBP8.74□□□□□ -1.01
VCAN-210ENST00000513960 ENTPD2Q9Y5L3 495 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 ASCC3Q8N3C0 2202 aaKnown RBP8.74□□□□□ -1.01
VCAN-210ENST00000513960 TRAV14DV4A0A0A6YYC5 116 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 OR5K4A6NMS3 321 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 XRCC3O43542 346 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 NDUFS6O75380 124 aaKnown RBP8.74□□□□□ -1.01
VCAN-210ENST00000513960 LY86O95711 162 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 ACAA1P09110 424 aaPredicted RBP8.74□□□□□ -1.01
VCAN-210ENST00000513960 SPARCP09486 303 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 SDHAP31040 664 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 NR0B1P51843 470 aaKnown RBP8.74□□□□□ -1.01
VCAN-210ENST00000513960 SLC9A3R2Q15599 337 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 ZNHIT3Q15649 155 aaPredicted RBP8.74□□□□□ -1.01
VCAN-210ENST00000513960 TSC22D1Q15714 1073 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 C2orf76Q3KRA6 126 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 ETV3LQ6ZN32 361 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 PRSS41Q7RTY9 318 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 CSNK1A1LQ8N752 337 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 GPR148Q8TDV2 347 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 S100PBPQ96BU1 408 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 COA4Q9NYJ1 87 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 A0A087WV62 115 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 SRPX2O60687 465 aaPredicted RBP8.74□□□□□ -1.01
VCAN-210ENST00000513960 TNFP01375 233 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 ADRA2CP18825 462 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 RAB6AP20340 208 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 DIO1P49895 249 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 IKZF1Q13422 519 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 SHHQ15465 462 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 ALG11Q2TAA5 492 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 Q6ZSR6 202 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 SLC36A1Q7Z2H8 476 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 ZAR1Q86SH2 424 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 COMMD2Q86X83 199 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 PHOSPHO1Q8TCT1 267 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 STACQ99469 402 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 PHB2Q99623 299 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 PRR13Q9NZ81 148 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 MSRAQ9UJ68 235 aa8.74□□□□□ -1.01
VCAN-210ENST00000513960 A0A0A6YYC8 382 aaPredicted RBP8.73□□□□□ -1.01
VCAN-210ENST00000513960 I3L1I5 382 aaPredicted RBP8.73□□□□□ -1.01
VCAN-210ENST00000513960 CTAG2O75638 210 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 ACTL6AO96019 429 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 SFTPBP07988 381 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 EMDP50402 254 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 YPEL5P62699 121 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 EBPQ15125 230 aaKnown RBP8.73□□□□□ -1.01
VCAN-210ENST00000513960 ELAVL1Q15717 326 aaKnown RBP8.73□□□□□ -1.01
VCAN-210ENST00000513960 KCNRGQ8N5I3 272 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 OR4K17Q8NGC6 315 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 OR6S1Q8NH40 331 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 FLVCR1-AS1Q8TAF5 88 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 ZNF417Q8TAU3 575 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 RGP1Q92546 391 aaPredicted RBP8.73□□□□□ -1.01
VCAN-210ENST00000513960 SLC25A36Q96CQ1 311 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 SPSB2Q99619 263 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 CHMP1AQ9HD42 196 aaPredicted RBP8.73□□□□□ -1.01
VCAN-210ENST00000513960 TMEM74BQ9NUR3 256 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 GHRLQ9UBU3 117 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 CDH23Q9H251 3354 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 EIF1AYO14602 144 aaKnown RBP8.73□□□□□ -1.01
VCAN-210ENST00000513960 IFNA4P05014 189 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 PI3P19957 117 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 ZNF616Q08AN1 781 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 HYAL1Q12794 435 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 JMJD6Q6NYC1 403 aaPredicted RBP8.73□□□□□ -1.01
VCAN-210ENST00000513960 BAHD1Q8TBE0 780 aaPredicted RBP8.73□□□□□ -1.01
VCAN-210ENST00000513960 RNF141Q8WVD5 230 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 SULT4A1Q9BR01 284 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 PILRAQ9UKJ1 303 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 FBXL21Q9UKT6 434 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 SLC22A13Q9Y226 551 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 ETV7Q9Y603 341 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 A0A0J9YY10 115 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 OIP5O43482 229 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 SCGB1D2O95969 90 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 LBX1P52954 281 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 GFOD2Q3B7J2 385 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 GLYATL3Q5SZD4 288 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 OR52W1Q6IF63 320 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 MOB3CQ70IA8 216 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 WDSUB1Q8N9V3 476 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 SLC2A12Q8TD20 617 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 PPP1R14AQ96A00 147 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 GSN-AS1Q9NRJ2 163 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 STARD5Q9NSY2 213 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 GRHPRQ9UBQ7 328 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 ZNF223Q9UK11 482 aaPredicted RBP8.73□□□□□ -1.01
VCAN-210ENST00000513960 DHDHQ9UQ10 334 aa8.73□□□□□ -1.01
VCAN-210ENST00000513960 A6NCN8 305 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 ICOSLGO75144 302 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 CSTAP01040 98 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 SMAD2Q15796 467 aaKnown RBP8.72□□□□□ -1.01
VCAN-210ENST00000513960 TTLL10Q6ZVT0 673 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 TMPRSS11FQ6ZWK6 438 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 ZNF563Q8TA94 476 aa8.72□□□□□ -1.01
VCAN-210ENST00000513960 MRPL38Q96DV4 380 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms