RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 GRTP1Q5TC63 336 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 PRAMEF8Q5VWM4 474 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 PRAMEF7Q5VXH5 474 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 ACSM2BQ68CK6 577 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 TMEM225Q6GV28 225 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 TTC27Q6P3X3 843 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 PAQR6Q6TCH4 344 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 TMEM107Q6UX40 140 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 BTNL3Q6UXE8 466 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 CCBE1Q6UXH8 406 aaPredicted RBP3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 FRRS1Q6ZNA5 592 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 RAPH1Q70E73 1250 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 GRINAQ7Z429 371 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 ZBED8Q8IZ13 594 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 PARP8Q8N3A8 854 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 SPICQ8N5J4 248 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 DPP10Q8N608 796 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 ZIC4Q8N9L1 334 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 GATSQ8NAP1 163 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 OR4S1Q8NGB4 309 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 RFWD2Q8NHY2 731 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 FAM76AQ8TAV0 307 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 DCAKDQ8WVC6 231 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 EXT2Q93063 718 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 PHF21BQ96EK2 531 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 METTL2AQ96IZ6 378 aaKnown RBP3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 CPNE1Q99829 537 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 GAL3ST1Q99999 423 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 KLHDC3Q9BQ90 382 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 THUMPD3Q9BV44 507 aaKnown RBP3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 CHIAQ9BZP6 476 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 CENPHQ9H3R5 247 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 CAB39LQ9H9S4 337 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 PATZ1Q9HBE1 687 aaKnown RBP3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 HINT3Q9NQE9 182 aaKnown RBP3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 MIEF1Q9NQG6 463 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 SLC6A13Q9NSD5 602 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 PPP1R14DQ9NXH3 145 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 B3GNT2Q9NY97 397 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 CHRNA9Q9UGM1 479 aa3.03□□□□□ -1.92
PDLIM5-218ENST00000513341 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 LCE6AA0A183 80 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CXorf65A6NEN9 183 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 GAGE10A6NGK3 116 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 DUXAA6NLW8 204 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 RNASEK-C17orf49H0YIS7 233 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 K7EIL1 84 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 PCDH7O60245 1069 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 TBX19O60806 448 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 KLHL2O95198 593 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 LGI1O95970 557 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CHRM4P08173 479 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 GUSBP08236 651 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 MELTFP08582 738 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 KRT16P08779 473 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 IGHV4-38-2P0DP08 117 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 UBL4AP11441 157 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF250P15622 560 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 UQCRC2P22695 453 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 NTSP30990 170 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 STX2P32856 288 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 TGFBR2P37173 567 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 ALDH3B1P43353 468 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 MAGEB1P43366 347 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 OR2B6P58173 313 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CCL8P80075 99 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 PAX2Q02962 417 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 BST1Q10588 318 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 DLG1Q12959 904 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 TRAF3Q13114 568 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 BAK1Q16611 211 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 DUSP5Q16690 384 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 TTMPQ5BVD1 217 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 SGO1Q5FBB7 561 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 PIK3CD-AS1Q5SR53 167 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 C6orf10Q5SRN2 563 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CASC10Q5T4H9 136 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 GKAP1Q5VSY0 366 aaPredicted RBP3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CLEC6AQ6EIG7 209 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 FAM71E1Q6IPT2 247 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 KRT80Q6KB66 452 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 MZT2BQ6NZ67 158 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CDC73Q6P1J9 531 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 KLC3Q6P597 504 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CFAP161Q6P656 301 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 Q6ZSV7 163 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 CREB3L2Q70SY1 520 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 EIF3MQ7L2H7 374 aaKnown RBP3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 LRP11Q86VZ4 500 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 LRRC28Q86X40 367 aaPredicted RBP3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 C1orf174Q8IYL3 243 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 ZDHHC23Q8IYP9 409 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 COX18Q8N8Q8 333 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 SCAIQ8N9R8 606 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 SPERTQ8NA61 448 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 OR4F6Q8NGB9 312 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 OR9K2Q8NGE7 335 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 OR10S1Q8NGN2 331 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 ZNF519Q8TB69 540 aa3.02□□□□□ -1.93
PDLIM5-218ENST00000513341 SYNPRQ8TBG9 265 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms