RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SNRPGP62308 76 aaKnown RBP8.18□□□□□ -1.1
VCAN-208ENST00000512590 TUBA1BP68363 451 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 TUBA4AP68366 448 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 HTR3DQ70Z44 454 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 TUBA1AQ71U36 451 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 ZNF519Q8TB69 540 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 MRPL37Q9BZE1 423 aaKnown RBP8.18□□□□□ -1.1
VCAN-208ENST00000512590 AK6Q9Y3D8 172 aaKnown RBP8.18□□□□□ -1.1
VCAN-208ENST00000512590 KRBOX1C9JBD0 128 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 TGFB1I1O43294 461 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 ACP2P11117 423 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 SCGB1A1P11684 91 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 OPRK1P41145 380 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 APOBEC1P41238 236 aaKnown RBP8.18□□□□□ -1.1
VCAN-208ENST00000512590 RSPO4Q2I0M5 234 aaPredicted RBP8.18□□□□□ -1.1
VCAN-208ENST00000512590 SPATA46Q5T0L3 261 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 OR10K2Q6IF99 312 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 BHLHA15Q7RTS1 189 aaPredicted RBP8.18□□□□□ -1.1
VCAN-208ENST00000512590 EDARADDQ8WWZ3 215 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 TP63Q9H3D4 680 aaPredicted RBP8.18□□□□□ -1.1
VCAN-208ENST00000512590 TMEM165Q9HC07 324 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 APOBEC3GQ9HC16 384 aaKnown RBP8.18□□□□□ -1.1
VCAN-208ENST00000512590 V9GYS6 101 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 CROCC2H7BZ55 1655 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 GPR31O00270 319 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 TNFRSF10CO14798 259 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 GUSBP08236 651 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 CXCR4P61073 352 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 OR1Q1Q15612 314 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 ADIPOQQ15848 244 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 TIGD3Q6B0B8 471 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 ZNF420Q8TAQ5 688 aaPredicted RBP8.18□□□□□ -1.1
VCAN-208ENST00000512590 ADAMTS16Q8TE57 1224 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 CNIH4Q9P003 139 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 SLC17A4Q9Y2C5 497 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 CORINQ9Y5Q5 1042 aa8.18□□□□□ -1.1
VCAN-208ENST00000512590 OR6C76A6NM76 312 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 VAMP5O95183 116 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 NRASP01111 189 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 GM2AP17900 193 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 SIGLEC14Q08ET2 396 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 AQP6Q13520 282 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 LRRC28Q86X40 367 aaPredicted RBP8.17□□□□□ -1.1
VCAN-208ENST00000512590 ZDHHC23Q8IYP9 409 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 TMEM102Q8N9M5 508 aaPredicted RBP8.17□□□□□ -1.1
VCAN-208ENST00000512590 CADM4Q8NFZ8 388 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 OR8J2Q8NGG1 315 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 OR5K2Q8NHB8 316 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 GPR119Q8TDV5 335 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 LINC01599Q8WXQ3 324 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 ORAI1Q96D31 301 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 PTDSS2Q9BVG9 487 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 ZNF552Q9H707 407 aaPredicted RBP8.17□□□□□ -1.1
VCAN-208ENST00000512590 FAM53CQ9NYF3 392 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 SLC23A1Q9UHI7 598 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 C15orf41Q9Y2V0 281 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 TEX264Q9Y6I9 313 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 A0A1B0GUH1 482 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 P2RY10O00398 339 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 CNMDO75829 334 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 TPT1P13693 172 aaKnown RBP8.17□□□□□ -1.1
VCAN-208ENST00000512590 TNFRSF17Q02223 184 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 TRA2AQ13595 282 aaKnown RBP eCLIP8.17□□□□□ -1.1
VCAN-208ENST00000512590 PIP5KL1Q5T9C9 394 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 FAM198BQ6UWH4 519 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 DRAM2Q6UX65 266 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 LSMEM1Q8N8F7 131 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 DNAJC19Q96DA6 116 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 MRGPRX2Q96LB1 330 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 CNTD2Q9H8S5 307 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 DMRT3Q9NQL9 472 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 WNT16Q9UBV4 365 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 CEPT1Q9Y6K0 416 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 SPHKAPQ2M3C7 1700 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 IGKV3OR2-268A0A0C4DH90 116 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 H7C1C5 153 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 ZNF623O75123 536 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 NPPAP01160 153 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 HTR4Q13639 388 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 PAFAH1B3Q15102 231 aaKnown RBP8.17□□□□□ -1.1
VCAN-208ENST00000512590 TMEM97Q5BJF2 176 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 CD276Q5ZPR3 534 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 DHRS7BQ6IAN0 325 aaPredicted RBP8.17□□□□□ -1.1
VCAN-208ENST00000512590 NUDT8Q8WV74 236 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 ZBTB8AQ96BR9 441 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 CXorf58Q96LI9 332 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 P2RX4Q99571 388 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 GABARAPL1Q9H0R8 117 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 MOB1AQ9H8S9 216 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 SLCO1B3Q9NPD5 702 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 AMDHD2Q9Y303 409 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 CTXN2P0C2S0 81 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 NPPBP16860 134 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 NAGAP17050 411 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 SOX8P57073 446 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 PRTGQ2VWP7 1150 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 CXorf67Q86X51 503 aaPredicted RBP8.17□□□□□ -1.1
VCAN-208ENST00000512590 OR52M1Q8NGK5 317 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 OR2V1Q8NHB1 315 aa8.17□□□□□ -1.1
VCAN-208ENST00000512590 KCNG3Q8TAE7 436 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms