RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 OR2T5Q6IEZ7 315 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 ALDH16A1Q8IZ83 802 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 OR2T29Q8NH02 315 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 NEU4Q8WWR8 484 aaPredicted RBP13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 FAM168AQ92567 244 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 FOXN4Q96NZ1 517 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 CHID1Q9BWS9 393 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 SRA1Q9HD15 236 aaKnown RBP13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 VNN3Q9NY84 501 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 IL20Q9NYY1 176 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 REV1Q9UBZ9 1251 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 DUSP13Q9UII6 198 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 FZR1Q9UM11 496 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 B9D1Q9UPM9 204 aa13.86□□□□□ -0.19
PDLIM5-212ENST00000509333 AQP12BA6NM10 295 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 C12orf71A8MTZ7 269 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 VWC2LB2RUY7 222 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 DCTN6O00399 190 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 GSC2O15499 205 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 CLPTM1O96005 669 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 RAP2AP10114 183 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 WNT5AP41221 380 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 RPS23P62266 143 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 LSM6P62312 80 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 BNIP1Q12981 228 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 KCNMB1Q16558 191 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 MICAQ29983 383 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 ZNF362Q5T0B9 420 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 ZNF774Q6NX45 483 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 ADCK1Q86TW2 530 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 GLB1L2Q8IW92 636 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 AQP12AQ8IXF9 295 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 ADGRG5Q8IZF4 528 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 OR6V1Q8N148 313 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 OR9Q2Q8NGE9 314 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 OR4K13Q8NH42 304 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 CANT1Q8WVQ1 401 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 C11orf40Q8WZ69 217 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 CCDC124Q96CT7 223 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 LRGUKQ96M69 825 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 TSSK2Q96PF2 358 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 SNX18Q96RF0 628 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 SYT3Q9BQG1 590 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 IFT27Q9BW83 186 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 BCL2L14Q9BZR8 327 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 MS4A5Q9H3V2 200 aa13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 MYEF2Q9P2K5 600 aaKnown RBP13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 NSD1Q96L73 2696 aaPredicted RBP13.85□□□□□ -0.19
PDLIM5-212ENST00000509333 YLPM1P49750 1951 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 CCNB2O95067 398 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 SLC25A16P16260 332 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 HIST1H1CP16403 213 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 CCNOP22674 350 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 GDI2P50395 445 aaKnown RBP13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 PDLIM4P50479 330 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 ERVS71-1P61550 626 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 LOXL1Q08397 574 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 DNAL1Q4LDG9 190 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 OTPQ5XKR4 325 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 RGS7BPQ6MZT1 257 aaPredicted RBP13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 ZNF620Q6ZNG0 422 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 FANK1Q8TC84 345 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 NMNAT3Q96T66 252 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 OR51B6Q9H340 312 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 RERGLQ9H628 205 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 EGLN3Q9H6Z9 239 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 U3KQV3 271 aa13.84□□□□□ -0.19
PDLIM5-212ENST00000509333 ANK3Q12955 4377 aaKnown RBP13.83□□□□□ -0.19
PDLIM5-212ENST00000509333 IGLV3-9A0A075B6K5 115 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 IGLV1-36A0A0B4J1U3 117 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 LOC390937A0A1W2PQ73 354 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 C5orf49A4QMS7 147 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 OR6C68A6NDL8 312 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 DNAJC8O75937 253 aaPredicted RBP13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 NGFP01138 241 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 LCKP06239 509 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 CSF3P09919 207 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 COX5BP10606 129 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 CRABP1P29762 137 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 ALDH3B1P43353 468 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 DBPQ10586 325 aaPredicted RBP13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 RASSF6Q6ZTQ3 369 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 ZNF101Q8IZC7 436 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 NPEPL1Q8NDH3 523 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 SYNPRQ8TBG9 265 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 CADM1Q9BY67 442 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 REEP1Q9H902 201 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 EIF3KQ9UBQ5 218 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 POMPQ9Y244 141 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 SAMHD1Q9Y3Z3 626 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 FKBP7Q9Y680 259 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 SONP18583 2426 aaKnown RBP13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 CR1P17927 2039 aa13.83□□□□□ -0.2
PDLIM5-212ENST00000509333 CHD3Q12873 2000 aaKnown RBP13.82□□□□□ -0.2
PDLIM5-212ENST00000509333 NDUFS8O00217 210 aa13.82□□□□□ -0.2
PDLIM5-212ENST00000509333 BHLHE40O14503 412 aa13.82□□□□□ -0.2
PDLIM5-212ENST00000509333 ICMTO60725 284 aa13.82□□□□□ -0.2
PDLIM5-212ENST00000509333 STAMBPO95630 424 aa13.82□□□□□ -0.2
PDLIM5-212ENST00000509333 GPANK1O95872 356 aa13.82□□□□□ -0.2
PDLIM5-212ENST00000509333 IGHV3-13P01766 116 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms