RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 TRAPPC6AO75865 159 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 HPRT1P00492 218 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 IGHV3-9P01782 118 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ARG1P05089 322 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 GLAP06280 429 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 STSP08842 583 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 TACSTD2P09758 323 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 KRTAP1-4P0C5Y4 121 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 SMIM10L1P0DMW3 83 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 CTRB1P17538 263 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 CCNE1P24864 410 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 F2RP25116 425 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 HOXA9P31269 272 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ARL2P36404 184 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 AQP2P41181 271 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 PTGDSP41222 190 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 RBM34P42696 430 aaKnown RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 KIR2DS2P43631 304 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 KIR2DS4P43632 304 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ALDH3B2P48448 385 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 POU3F4P49335 361 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 CRISP1P54107 249 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 UBE2G2P60604 165 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 MYL6P60660 151 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 RPS15AP62244 130 aaKnown RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 C2orf54Q08AI8 447 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 TCP10Q12799 353 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 QPRTQ15274 297 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 RBM48Q5RL73 367 aaKnown RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 IDNKQ5T6J7 187 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 OGFRL1Q5TC84 451 aaPredicted RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 SDHAF4Q5VUM1 108 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF57Q68EA5 555 aaPredicted RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 CTRB2Q6GPI1 263 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF774Q6NX45 483 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 FAHD1Q6P587 224 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 CLEC18BQ6UXF7 455 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF600Q6ZNG1 722 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 Q6ZSR3 168 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ACOT7LQ6ZUV0 252 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 H2AFVQ71UI9 128 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ABHD13Q7L211 337 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 MRPL52Q86TS9 123 aaKnown RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 LHFPL3Q86UP9 236 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 PPP1R27Q86WC6 154 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 CDC20BQ86Y33 519 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 NELFCDQ8IXH7 590 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 PRR22Q8IZ63 422 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 LINC00612Q8N6U2 182 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF557Q8N988 423 aaPredicted RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ACBD4Q8NC06 268 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR2A1Q8NGT9 310 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR10Z1Q8NGY1 313 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 OR5B3Q8NH48 314 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ZNF461Q8TAF7 563 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 UBA3Q8TBC4 463 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 FANK1Q8TC84 345 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 NPRL2Q8WTW4 380 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ANKRD7Q92527 254 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 NDRG1Q92597 394 aaKnown RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 CPNE4Q96A23 557 aaPredicted RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 EEF1AKMT3Q96AZ1 226 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 FGGYQ96C11 551 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 CMTM5Q96DZ9 223 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 SMIM10Q96HG1 83 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 B3GALT6Q96L58 329 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 FAM218AQ96MZ4 157 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 OXGR1Q96P68 337 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 MS4A4EQ96PG1 132 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 MCHR1Q99705 422 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 UTP23Q9BRU9 249 aaKnown RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 NAT9Q9BTE0 207 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 FAIM2Q9BWQ8 316 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 FGFBP2Q9BYJ0 223 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 UPF3BQ9BZI7 483 aaKnown RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ACTR6Q9GZN1 396 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ING2Q9H160 280 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 DSN1Q9H410 356 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 C1orf198Q9H425 327 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 RETNQ9HD89 108 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 IL1RAPQ9NPH3 570 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 MEPEQ9NQ76 525 aaPredicted RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 C1orf109Q9NX04 203 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 SDHAF2Q9NX18 166 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 RHBDL2Q9NX52 303 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 SPRR3Q9UBC9 169 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 HMGXB4Q9UGU5 601 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 MRM2Q9UI43 246 aaKnown RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 ATPIF1Q9UII2 106 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 RIMS3Q9UJD0 308 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 KLK13Q9UKR3 277 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 RCL1Q9Y2P8 373 aaKnown RBP1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 PPIL1Q9Y3C6 166 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 MAPK8IP3Q9UPT6 1336 aa1.89□□□□□ -2.11
DEPDC1B-204ENST00000509006 MAP3K5Q99683 1374 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 IGHV1OR21-1A0A087WYE8 117 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 IGHV3-38A0A0C4DH36 116 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 PSMB11A5LHX3 300 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 FABP12A6NFH5 140 aa1.88□□□□□ -2.11
DEPDC1B-204ENST00000509006 VSTM2BA6NLU5 285 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms